This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2je2
From Proteopedia
(Difference between revisions)
| (7 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2je2.png|left|200px]] | ||
| - | + | ==Cytochrome P460 from Nitrosomonas europaea - probable nonphysiological oxidized form== | |
| - | + | <StructureSection load='2je2' size='340' side='right'caption='[[2je2]], [[Resolution|resolution]] 1.80Å' scene=''> | |
| - | === | + | == Structural highlights == |
| - | + | <table><tr><td colspan='2'>[[2je2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Nitrosomonas_europaea Nitrosomonas europaea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JE2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JE2 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> | |
| - | == | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2je2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2je2 OCA], [https://pdbe.org/2je2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2je2 RCSB], [https://www.ebi.ac.uk/pdbsum/2je2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2je2 ProSAT]</span></td></tr> |
| - | [[2je2]] is a 1 chain structure with sequence from [ | + | </table> |
| - | + | == Function == | |
| - | == | + | [https://www.uniprot.org/uniprot/Q50927_NITER Q50927_NITER] |
| - | < | + | == Evolutionary Conservation == |
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/je/2je2_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2je2 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
[[Category: Nitrosomonas europaea]] | [[Category: Nitrosomonas europaea]] | ||
| - | [[Category: Elmore | + | [[Category: Elmore BO]] |
| - | [[Category: Ferrara | + | [[Category: Ferrara JD]] |
| - | [[Category: Hooper | + | [[Category: Hooper AB]] |
| - | [[Category: Pearson | + | [[Category: Pearson AR]] |
| - | [[Category: Wilmot | + | [[Category: Wilmot CM]] |
| - | [[Category: Yang | + | [[Category: Yang C]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Cytochrome P460 from Nitrosomonas europaea - probable nonphysiological oxidized form
| |||||||||||
