2jkb

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{{Seed}}
 
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[[Image:2jkb.png|left|200px]]
 
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==Crystal structure of Streptococcus pneumoniae NanB in complex with 2, 7-anhydro-Neu5Ac==
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The line below this paragraph, containing "STRUCTURE_2jkb", creates the "Structure Box" on the page.
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<StructureSection load='2jkb' size='340' side='right'caption='[[2jkb]], [[Resolution|resolution]] 1.54&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2jkb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pneumoniae_TIGR4 Streptococcus pneumoniae TIGR4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JKB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2JKB FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.54&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=SKD:2-ACETYLAMINO-7-(1,2-DIHYDROXY-ETHYL)-3-HYDROXY-6,8-DIOXA-BICYCLO[3.2.1]OCTANE-5-CARBOXYLIC+ACID'>SKD</scene></td></tr>
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{{STRUCTURE_2jkb| PDB=2jkb | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2jkb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2jkb OCA], [https://pdbe.org/2jkb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2jkb RCSB], [https://www.ebi.ac.uk/pdbsum/2jkb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2jkb ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/NANB_STRPN NANB_STRPN]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jk/2jkb_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2jkb ConSurf].
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<div style="clear:both"></div>
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===CRYSTAL STRUCTURE OF STREPTOCOCCUS PNEUMONIAE NANB IN COMPLEX WITH 2,7-ANHYDRO-NEU5AC===
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==See Also==
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*[[Neuraminidase 3D structures|Neuraminidase 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_18775704}}, adds the Publication Abstract to the page
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[[Category: Large Structures]]
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(as it appears on PubMed at http://www.pubmed.gov), where 18775704 is the PubMed ID number.
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[[Category: Streptococcus pneumoniae TIGR4]]
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[[Category: Gut H]]
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{{ABSTRACT_PUBMED_18775704}}
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[[Category: King SJ]]
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[[Category: Walsh MA]]
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==About this Structure==
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2JKB is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pneumoniae Streptococcus pneumoniae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JKB OCA].
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==Reference==
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Structural and functional studies of Streptococcus pneumoniae neuraminidase B: An intramolecular trans-sialidase., Gut H, King SJ, Walsh MA, FEBS Lett. 2008 Oct 15;582(23-24):3348-52. Epub 2008 Sep 5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18775704 18775704]
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[[Category: Anhydrosialidase]]
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[[Category: Single protein]]
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[[Category: Streptococcus pneumoniae]]
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[[Category: Gut, H.]]
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[[Category: King, S J.]]
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[[Category: Walsh, M A.]]
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[[Category: Glycosidase]]
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[[Category: Intramolecular trans-sialidase]]
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[[Category: Lyase]]
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[[Category: Neuraminidase]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Nov 12 20:43:17 2008''
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Current revision

Crystal structure of Streptococcus pneumoniae NanB in complex with 2, 7-anhydro-Neu5Ac

PDB ID 2jkb

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