2k3r

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:43, 1 May 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2k3r.jpg|left|200px]]
 
-
<!--
+
==Pfu Rpp21 structure and assignments==
-
The line below this paragraph, containing "STRUCTURE_2k3r", creates the "Structure Box" on the page.
+
<StructureSection load='2k3r' size='340' side='right'caption='[[2k3r]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2k3r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K3R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K3R FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_2k3r| PDB=2k3r | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k3r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k3r OCA], [https://pdbe.org/2k3r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k3r RCSB], [https://www.ebi.ac.uk/pdbsum/2k3r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k3r ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/RNP4_PYRFU RNP4_PYRFU] Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. The RNA is catalytic, but its KM for pre-tRNA is 170-fold decreased in the presence of the 4 known protein subunits (Rnp1-4). The protein subunits also decrease the amount of Mg(2+) needed for activity.<ref>PMID:17053064</ref> <ref>PMID:21683084</ref> <ref>PMID:22298511</ref>
-
===Pfu Rpp21 structure and assignments===
+
==See Also==
-
 
+
*[[Ribonuclease 3D structures|Ribonuclease 3D structures]]
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_18922021}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 18922021 is the PubMed ID number.
+
</StructureSection>
-
-->
+
[[Category: Large Structures]]
-
{{ABSTRACT_PUBMED_18922021}}
+
-
 
+
-
==About this Structure==
+
-
2K3R is a 1 chain structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K3R OCA].
+
-
 
+
-
==Reference==
+
-
Solution structure of Pyrococcus furiosus RPP21, a component of the archaeal RNase P holoenzyme, and interactions with its RPP29 protein partner., Amero CD, Boomershine WP, Xu Y, Foster M, Biochemistry. 2008 Nov 11;47(45):11704-10. Epub 2008 Oct 16. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18922021 18922021]
+
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
-
[[Category: Ribonuclease P]]
+
[[Category: Amero CD]]
-
[[Category: Pdbx_ordinal=, <PDBx:audit_author.]]
+
[[Category: Boomershine WP]]
-
[[Category: Hydrolase]]
+
[[Category: Foster MP]]
-
[[Category: Nmr]]
+
[[Category: Xu Y]]
-
[[Category: Pfu rpp21]]
+
-
[[Category: Rnase p]]
+
-
[[Category: Trna processing]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri Dec 5 09:12:50 2008''
+

Current revision

Pfu Rpp21 structure and assignments

PDB ID 2k3r

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2k3r"
Personal tools