2k5n

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:44, 1 May 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Solution NMR Structure of the N-Terminal Domain of Protein ECA1580 from Erwinia carotovora, Northeast Structural Genomics Consortium Target EwR156A==
==Solution NMR Structure of the N-Terminal Domain of Protein ECA1580 from Erwinia carotovora, Northeast Structural Genomics Consortium Target EwR156A==
-
<StructureSection load='2k5n' size='340' side='right' caption='[[2k5n]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2k5n' size='340' side='right'caption='[[2k5n]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2k5n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pectobacterium_atrosepticum Pectobacterium atrosepticum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5N OCA]. <br>
+
<table><tr><td colspan='2'>[[2k5n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pectobacterium_atrosepticum Pectobacterium atrosepticum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K5N FirstGlance]. <br>
-
</td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ECA1580 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29471 Pectobacterium atrosepticum])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Glucokinase Glucokinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.1.2 2.7.1.2] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k5n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k5n OCA], [https://pdbe.org/2k5n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k5n RCSB], [https://www.ebi.ac.uk/pdbsum/2k5n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k5n ProSAT], [https://www.topsan.org/Proteins/NESGC/2k5n TOPSAN]</span></td></tr>
-
<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2k5n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k5n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2k5n RCSB], [http://www.ebi.ac.uk/pdbsum/2k5n PDBsum], [http://www.topsan.org/Proteins/NESGC/2k5n TOPSAN]</span></td></tr>
+
</table>
-
<table>
+
== Function ==
 +
[https://www.uniprot.org/uniprot/Q6D6V0_PECAS Q6D6V0_PECAS]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k5n_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k5n_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2k5n ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
-
== References ==
 
-
<references/>
 
__TOC__
__TOC__
</StructureSection>
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pectobacterium atrosepticum]]
[[Category: Pectobacterium atrosepticum]]
-
[[Category: Acton, T B.]]
+
[[Category: Acton TB]]
-
[[Category: Ciccosanti, C.]]
+
[[Category: Ciccosanti C]]
-
[[Category: Eletsky, A.]]
+
[[Category: Eletsky A]]
-
[[Category: Everett, J K.]]
+
[[Category: Everett JK]]
-
[[Category: Jiang, M.]]
+
[[Category: Jiang M]]
-
[[Category: Lee, D.]]
+
[[Category: Lee D]]
-
[[Category: Lui, J.]]
+
[[Category: Lui J]]
-
[[Category: Mills, J L.]]
+
[[Category: Mills JL]]
-
[[Category: Montelione, G T.]]
+
[[Category: Montelione GT]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Rost B]]
-
[[Category: Rost, B.]]
+
[[Category: Swapna GVT]]
-
[[Category: Swapna, G V.T.]]
+
[[Category: Szyperski T]]
-
[[Category: Szyperski, T.]]
+
[[Category: Xiao R]]
-
[[Category: Xiao, R.]]
+
[[Category: Zhang Q]]
-
[[Category: Zhang, Q.]]
+
-
[[Category: Cold shock protein]]
+
-
[[Category: Gft nmr]]
+
-
[[Category: Nesgc]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Ob fold]]
+
-
[[Category: Protein structure]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Unknown function]]
+

Current revision

Solution NMR Structure of the N-Terminal Domain of Protein ECA1580 from Erwinia carotovora, Northeast Structural Genomics Consortium Target EwR156A

PDB ID 2k5n

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools