This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2kjl

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:46, 1 May 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2kjl.png|left|200px]]
 
-
{{STRUCTURE_2kjl| PDB=2kjl | SCENE= }}
+
==NMR structures of a designed Cyanovirin-N homolog lectin; LKAMG==
-
 
+
<StructureSection load='2kjl' size='340' side='right'caption='[[2kjl]]' scene=''>
-
===NMR structures of a designed Cyanovirin-N homolog lectin; LKAMG===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2kjl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Neurospora_crassa Neurospora crassa] and [https://en.wikipedia.org/wiki/Tuber_borchii Tuber borchii]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KJL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KJL FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_18400178}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kjl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kjl OCA], [https://pdbe.org/2kjl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kjl RCSB], [https://www.ebi.ac.uk/pdbsum/2kjl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kjl ProSAT]</span></td></tr>
-
==About this Structure==
+
</table>
-
[[2kjl]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Tuber_borchii Tuber borchii]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KJL OCA].
+
== Function ==
-
 
+
[https://www.uniprot.org/uniprot/CVNH_NEUCR CVNH_NEUCR] Mannose-binding lectin.<ref>PMID:18400178</ref> [https://www.uniprot.org/uniprot/CVNH_TUBBO CVNH_TUBBO] Mannose-binding lectin.<ref>PMID:18400178</ref>
-
==Reference==
+
== Evolutionary Conservation ==
-
<ref group="xtra">PMID:018400178</ref><references group="xtra"/>
+
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kj/2kjl_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kjl ConSurf].
 +
<div style="clear:both"></div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Neurospora crassa]]
[[Category: Tuber borchii]]
[[Category: Tuber borchii]]
-
[[Category: Gronenborn, A M.]]
+
[[Category: Gronenborn AM]]
-
[[Category: Koharudin, L M.I.]]
+
[[Category: Koharudin LMI]]
-
[[Category: Cvnh]]
+
-
[[Category: Cyanovirin-n]]
+
-
[[Category: Lectin]]
+
-
[[Category: Sugar binding protein]]
+

Current revision

NMR structures of a designed Cyanovirin-N homolog lectin; LKAMG

PDB ID 2kjl

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools