This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2kq2

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2kq2" [edit=sysop:move=sysop])
Current revision (06:47, 1 May 2024) (edit) (undo)
 
(6 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2kq2.png|left|200px]]
 
-
{{STRUCTURE_2kq2| PDB=2kq2 | SCENE= }}
+
==Solution NMR structure of the apo form of a ribonuclease H domain of protein DSY1790 from Desulfitobacterium hafniense, Northeast Structural Genomics target DhR1A==
-
 
+
<StructureSection load='2kq2' size='340' side='right'caption='[[2kq2]]' scene=''>
-
===Solution NMR structure of the apo form of a ribonuclease H domain of protein DSY1790 from Desulfitobacterium hafniense, Northeast Structural Genomics target DhR1A===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2kq2]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfitobacterium_hafniense_DCB-2 Desulfitobacterium hafniense DCB-2]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KQ2 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KQ2 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kq2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kq2 OCA], [https://pdbe.org/2kq2 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kq2 RCSB], [https://www.ebi.ac.uk/pdbsum/2kq2 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kq2 ProSAT]</span></td></tr>
-
[[2kq2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfitobacterium_hafniense_dcb-2 Desulfitobacterium hafniense dcb-2]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KQ2 OCA].
+
</table>
-
[[Category: Desulfitobacterium hafniense dcb-2]]
+
== Function ==
-
[[Category: Acton, T B.]]
+
[https://www.uniprot.org/uniprot/B8FYP4_DESHD B8FYP4_DESHD]
-
[[Category: Belote, R L.]]
+
== Evolutionary Conservation ==
-
[[Category: Buchwald, W A.]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Ciccosanti, C.]]
+
Check<jmol>
-
[[Category: Eletsky, A.]]
+
<jmolCheckbox>
-
[[Category: Everett, J K.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kq/2kq2_consurf.spt"</scriptWhenChecked>
-
[[Category: Hua, J.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Janjua, H.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Mills, J L.]]
+
</jmolCheckbox>
-
[[Category: Montelione, G T.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kq2 ConSurf].
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
<div style="clear:both"></div>
-
[[Category: Nair, R.]]
+
__TOC__
-
[[Category: Rost, B.]]
+
</StructureSection>
-
[[Category: Szyperski, T.]]
+
[[Category: Desulfitobacterium hafniense DCB-2]]
-
[[Category: Xiao, R.]]
+
[[Category: Large Structures]]
-
[[Category: Apo enzyme]]
+
[[Category: Acton TB]]
-
[[Category: Hydrolase]]
+
[[Category: Belote RL]]
-
[[Category: Nesg]]
+
[[Category: Buchwald WA]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Ciccosanti C]]
-
[[Category: Protein structure]]
+
[[Category: Eletsky A]]
-
[[Category: Protein structure initiative]]
+
[[Category: Everett JK]]
-
[[Category: Psi]]
+
[[Category: Hua J]]
-
[[Category: Ribonuclease h]]
+
[[Category: Janjua H]]
-
[[Category: Structural genomic]]
+
[[Category: Mills JL]]
 +
[[Category: Montelione GT]]
 +
[[Category: Nair R]]
 +
[[Category: Rost B]]
 +
[[Category: Szyperski T]]
 +
[[Category: Xiao R]]

Current revision

Solution NMR structure of the apo form of a ribonuclease H domain of protein DSY1790 from Desulfitobacterium hafniense, Northeast Structural Genomics target DhR1A

PDB ID 2kq2

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2kq2"
Personal tools