This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2kvk

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (06:49, 1 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2kvk.png|left|200px]]
 
-
<!--
+
==Solution structure of ADF/cofilin (LDCOF) from Leishmania donovani==
-
The line below this paragraph, containing "STRUCTURE_2kvk", creates the "Structure Box" on the page.
+
<StructureSection load='2kvk' size='340' side='right'caption='[[2kvk]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2kvk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Leishmania_donovani Leishmania donovani]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2kd5 2kd5]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KVK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KVK FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kvk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kvk OCA], [https://pdbe.org/2kvk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kvk RCSB], [https://www.ebi.ac.uk/pdbsum/2kvk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kvk ProSAT]</span></td></tr>
-
{{STRUCTURE_2kvk| PDB=2kvk | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Solution structure of ADF/cofilin (LDCOF) from Leishmania donovani===
+
[https://www.uniprot.org/uniprot/Q2QKR1_LEIDO Q2QKR1_LEIDO]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
<!--
+
Check<jmol>
-
The line below this paragraph, {{ABSTRACT_PUBMED_20627129}}, adds the Publication Abstract to the page
+
<jmolCheckbox>
-
(as it appears on PubMed at http://www.pubmed.gov), where 20627129 is the PubMed ID number.
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kv/2kvk_consurf.spt"</scriptWhenChecked>
-
-->
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
{{ABSTRACT_PUBMED_20627129}}
+
<text>to colour the structure by Evolutionary Conservation</text>
-
 
+
</jmolCheckbox>
-
==About this Structure==
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kvk ConSurf].
-
[[2kvk]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_donovani Leishmania donovani]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2kd5 2kd5]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KVK OCA].
+
<div style="clear:both"></div>
-
 
+
__TOC__
-
==Reference==
+
</StructureSection>
-
<ref group="xtra">PMID:20627129</ref><ref group="xtra">PMID:19844807</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Leishmania donovani]]
+
-
[[Category: Arora, A.]]
+
-
[[Category: Gupta, C M.]]
+
-
[[Category: Jain, A.]]
+
-
[[Category: Pathak, P P.]]
+
-
[[Category: Pulavarti, S V.]]
+
-
[[Category: Sahasrabuddhe, A A.]]
+
-
[[Category: Adf/cofilin]]
+
-
[[Category: Hormone]]
+
[[Category: Leishmania donovani]]
[[Category: Leishmania donovani]]
 +
[[Category: Arora A]]
 +
[[Category: Gupta CM]]
 +
[[Category: Jain A]]
 +
[[Category: Pathak PP]]
 +
[[Category: Pulavarti SV]]
 +
[[Category: Sahasrabuddhe AA]]

Current revision

Solution structure of ADF/cofilin (LDCOF) from Leishmania donovani

PDB ID 2kvk

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2kvk"
Personal tools