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2kym

From Proteopedia

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{{Seed}}
 
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[[Image:2kym.jpg|left|200px]]
 
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==Solution structure of the Bem1p SH3-CI domain from L.elongisporus in complex with Ste20p peptide==
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The line below this paragraph, containing "STRUCTURE_2kym", creates the "Structure Box" on the page.
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<StructureSection load='2kym' size='340' side='right'caption='[[2kym]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2kym]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Lodderomyces_elongisporus_NRRL_YB-4239 Lodderomyces elongisporus NRRL YB-4239] and [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KYM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KYM FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kym FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kym OCA], [https://pdbe.org/2kym PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kym RCSB], [https://www.ebi.ac.uk/pdbsum/2kym PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kym ProSAT]</span></td></tr>
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{{STRUCTURE_2kym| PDB=2kym | SCENE= }}
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</table>
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== Function ==
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===Solution structure of the Bem1p SH3-CI domain from L.elongisporus in complex with Ste20p peptide===
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[https://www.uniprot.org/uniprot/A5E3P5_LODEL A5E3P5_LODEL]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==About this Structure==
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Check<jmol>
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2KYM is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Lodderomyces_elongisporus Lodderomyces elongisporus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KYM OCA].
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<jmolCheckbox>
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[[Category: Lodderomyces elongisporus]]
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ky/2kym_consurf.spt"</scriptWhenChecked>
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[[Category: Davidson, A R.]]
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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[[Category: Gorelik, M.]]
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<text>to colour the structure by Evolutionary Conservation</text>
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[[Category: Muhandiram, R.]]
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</jmolCheckbox>
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[[Category: Bem1p]]
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kym ConSurf].
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[[Category: Cdc42p-interacting]]
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<div style="clear:both"></div>
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[[Category: Scaffold]]
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__TOC__
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[[Category: Sh3 domain]]
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</StructureSection>
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[[Category: Sh3-ci]]
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[[Category: Large Structures]]
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[[Category: Signaling protein]]
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[[Category: Lodderomyces elongisporus NRRL YB-4239]]
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[[Category: Ste20p prr]]
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[[Category: Saccharomyces cerevisiae]]
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[[Category: Davidson AR]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 23 08:46:29 2010''
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[[Category: Gorelik M]]
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[[Category: Muhandiram R]]

Current revision

Solution structure of the Bem1p SH3-CI domain from L.elongisporus in complex with Ste20p peptide

PDB ID 2kym

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