This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2rr3

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:06, 1 May 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:2rr3.jpg|left|200px]]
 
-
<!--
+
==Solution structure of the complex between human VAP-A MSP domain and human OSBP FFAT motif==
-
The line below this paragraph, containing "STRUCTURE_2rr3", creates the "Structure Box" on the page.
+
<StructureSection load='2rr3' size='340' side='right'caption='[[2rr3]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2rr3]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RR3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RR3 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2rr3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2rr3 OCA], [https://pdbe.org/2rr3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2rr3 RCSB], [https://www.ebi.ac.uk/pdbsum/2rr3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2rr3 ProSAT]</span></td></tr>
-
{{STRUCTURE_2rr3| PDB=2rr3 | SCENE= }}
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/VAPA_HUMAN VAPA_HUMAN] May play a role in vesicle trafficking.<ref>PMID:11511104</ref> <ref>PMID:19289470</ref>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rr/2rr3_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2rr3 ConSurf].
 +
<div style="clear:both"></div>
-
===Solution structure of the complex between human VAP-A MSP domain and human OSBP FFAT motif===
+
==See Also==
-
 
+
*[[Vesicle-associated membrane protein 3D structures|Vesicle-associated membrane protein 3D structures]]
-
 
+
== References ==
-
<!--
+
<references/>
-
The line below this paragraph, {{ABSTRACT_PUBMED_20178991}}, adds the Publication Abstract to the page
+
__TOC__
-
(as it appears on PubMed at http://www.pubmed.gov), where 20178991 is the PubMed ID number.
+
</StructureSection>
-
-->
+
-
{{ABSTRACT_PUBMED_20178991}}
+
-
 
+
-
==About this Structure==
+
-
2RR3 is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RR3 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:20178991</ref><references group="xtra"/>
+
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
-
[[Category: Fukada, H.]]
+
[[Category: Large Structures]]
-
[[Category: Furuita, K.]]
+
[[Category: Fukada H]]
-
[[Category: Jee, J.]]
+
[[Category: Furuita K]]
-
[[Category: Kojima, C.]]
+
[[Category: Jee J]]
-
[[Category: Mishima, M.]]
+
[[Category: Kojima C]]
-
[[Category: Cytoplasm]]
+
[[Category: Mishima M]]
-
[[Category: Endoplasmic reticulum]]
+
-
[[Category: Lipid binding]]
+
-
[[Category: Lipid transport]]
+
-
[[Category: Major sperm protein domain]]
+
-
[[Category: Membrane protein-transport protein complex]]
+
-
[[Category: Protein binding]]
+
-
[[Category: Protein-peptide complex]]
+
-
[[Category: Transport]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 24 08:50:11 2010''
+

Current revision

Solution structure of the complex between human VAP-A MSP domain and human OSBP FFAT motif

PDB ID 2rr3

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2rr3"
Personal tools