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2vfl

From Proteopedia

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{{Seed}}
 
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[[Image:2vfl.png|left|200px]]
 
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==AKAP18 delta central domain - CMP==
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The line below this paragraph, containing "STRUCTURE_2vfl", creates the "Structure Box" on the page.
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<StructureSection load='2vfl' size='340' side='right'caption='[[2vfl]], [[Resolution|resolution]] 2.25&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[2vfl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VFL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2VFL FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.25&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C5P:CYTIDINE-5-MONOPHOSPHATE'>C5P</scene></td></tr>
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{{STRUCTURE_2vfl| PDB=2vfl | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2vfl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2vfl OCA], [https://pdbe.org/2vfl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2vfl RCSB], [https://www.ebi.ac.uk/pdbsum/2vfl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2vfl ProSAT]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vf/2vfl_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2vfl ConSurf].
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<div style="clear:both"></div>
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===AKAP18 DELTA CENTRAL DOMAIN- CMP===
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==See Also==
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*[[A-kinase anchor protein 3D structures|A-kinase anchor protein 3D structures]]
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__TOC__
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<!--
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_18082768}}, adds the Publication Abstract to the page
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(as it appears on PubMed at http://www.pubmed.gov), where 18082768 is the PubMed ID number.
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-->
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{{ABSTRACT_PUBMED_18082768}}
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==About this Structure==
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2VFL is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2VFL OCA].
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==Reference==
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AKAP18 contains a phosphoesterase domain that binds AMP., Gold MG, Smith FD, Scott JD, Barford D, J Mol Biol. 2008 Feb 1;375(5):1329-43. Epub 2007 Nov 22. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/18082768 18082768]
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Barford, D.]]
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[[Category: Barford D]]
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[[Category: Gold, M G.]]
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[[Category: Gold MG]]
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[[Category: Scott, J D.]]
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[[Category: Scott JD]]
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[[Category: Smith, F D.]]
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[[Category: Smith FD]]
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[[Category: Akap]]
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[[Category: Apo]]
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[[Category: Camp]]
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[[Category: Cmp]]
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[[Category: Hydrolase]]
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[[Category: Phosphoesterase]]
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[[Category: Pka]]
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[[Category: Scaffold]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jul 28 16:16:01 2008''
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Current revision

AKAP18 delta central domain - CMP

PDB ID 2vfl

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