This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4b4i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (07:17, 1 May 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==1.20 A Structure of Lysozyme Crystallized with (S)-2-methyl-2,4- pentanediol==
==1.20 A Structure of Lysozyme Crystallized with (S)-2-methyl-2,4- pentanediol==
-
<StructureSection load='4b4i' size='340' side='right' caption='[[4b4i]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
+
<StructureSection load='4b4i' size='340' side='right'caption='[[4b4i]], [[Resolution|resolution]] 1.20&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4b4i]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4B4I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4B4I FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4b4i]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4B4I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4B4I FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.2&#8491;</td></tr>
-
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4b49|4b49]], [[4b4e|4b4e]], [[4b4j|4b4j]]</td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MPD:(4S)-2-METHYL-2,4-PENTANEDIOL'>MPD</scene></td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4b4i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4b4i OCA], [https://pdbe.org/4b4i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4b4i RCSB], [https://www.ebi.ac.uk/pdbsum/4b4i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4b4i ProSAT]</span></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4b4i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4b4i OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4b4i RCSB], [http://www.ebi.ac.uk/pdbsum/4b4i PDBsum]</span></td></tr>
+
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
+
[https://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
==See Also==
==See Also==
Line 18: Line 18:
</StructureSection>
</StructureSection>
[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
-
[[Category: Lysozyme]]
+
[[Category: Large Structures]]
-
[[Category: Asherie, N]]
+
[[Category: Asherie N]]
-
[[Category: Axelbaum, A]]
+
[[Category: Axelbaum A]]
-
[[Category: Berger, J]]
+
[[Category: Berger J]]
-
[[Category: Jakoncic, J]]
+
[[Category: Jakoncic J]]
-
[[Category: Stauber, M]]
+
[[Category: Stauber M]]
-
[[Category: Chirality]]
+
-
[[Category: Hydrolase]]
+

Current revision

1.20 A Structure of Lysozyme Crystallized with (S)-2-methyl-2,4- pentanediol

PDB ID 4b4i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools