This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1ro8

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:25, 1 May 2024) (edit) (undo)
 
(9 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1ro8.png|left|200px]]
 
-
<!--
+
==Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analogue, cytidine-5'-monophosphate==
-
The line below this paragraph, containing "STRUCTURE_1ro8", creates the "Structure Box" on the page.
+
<StructureSection load='1ro8' size='340' side='right'caption='[[1ro8]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1ro8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RO8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RO8 FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C5P:CYTIDINE-5-MONOPHOSPHATE'>C5P</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
{{STRUCTURE_1ro8| PDB=1ro8 | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ro8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ro8 OCA], [https://pdbe.org/1ro8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ro8 RCSB], [https://www.ebi.ac.uk/pdbsum/1ro8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ro8 ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9LAK3_CAMJU Q9LAK3_CAMJU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ro/1ro8_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ro8 ConSurf].
 +
<div style="clear:both"></div>
-
===Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analogue, cytidine-5'-monophosphate===
+
==See Also==
-
 
+
*[[Sialyltransferase 3D structures|Sialyltransferase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_14730352}}, adds the Publication Abstract to the page
+
-
(as it appears on PubMed at http://www.pubmed.gov), where 14730352 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_14730352}}
+
-
 
+
-
==About this Structure==
+
-
1RO8 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RO8 OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:14730352</ref><references group="xtra"/>
+
[[Category: Campylobacter jejuni]]
[[Category: Campylobacter jejuni]]
-
[[Category: Chiu, C P.]]
+
[[Category: Large Structures]]
-
[[Category: Gilbert, M.]]
+
[[Category: Chiu CP]]
-
[[Category: Lairson, L L.]]
+
[[Category: Gilbert M]]
-
[[Category: Lim, D.]]
+
[[Category: Lairson LL]]
-
[[Category: Strynadka, N C.]]
+
[[Category: Lim D]]
-
[[Category: Wakarchuk, W W.]]
+
[[Category: Strynadka NC]]
-
[[Category: Watts, A G.]]
+
[[Category: Wakarchuk WW]]
-
[[Category: Withers, S G.]]
+
[[Category: Watts AG]]
-
[[Category: Mixed alpha/beta]]
+
[[Category: Withers SG]]
-
[[Category: Rossmann fold]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 02:48:01 2009''
+

Current revision

Structural analysis of the sialyltransferase CstII from Campylobacter jejuni in complex with a substrate analogue, cytidine-5'-monophosphate

PDB ID 1ro8

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1ro8"
Personal tools