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1rxl

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(New page: 200px<br /><applet load="1rxl" size="450" color="white" frame="true" align="right" spinBox="true" caption="1rxl" /> '''Solution structure of the engineered protein...)
Current revision (08:27, 1 May 2024) (edit) (undo)
 
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[[Image:1rxl.gif|left|200px]]<br /><applet load="1rxl" size="450" color="white" frame="true" align="right" spinBox="true"
 
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caption="1rxl" />
 
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'''Solution structure of the engineered protein Afae-dsc'''<br />
 
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==Overview==
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==Solution structure of the engineered protein Afae-dsc==
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Pathogenic bacteria possess adhesion protein complexes that play essential, roles in targeting host cells and in propagating infection. Although each, family of adhesion proteins is generally associated with a specific human, disease, the Dr family from Escherichia coli is a notable exception, as, its members are associated with both diarrheal and urinary tract, infections. These proteins are reported to form both fimbrial and, afimbrial structures at the bacterial cell surface and target a common, host cell receptor, the decay-accelerating factor (DAF or CD55). Using the, newly solved three-dimensional structure of AfaE, we have constructed a, robust atomic resolution model that reveals the structural basis for, assembly by donor strand complementation and for the architecture of, capped surface fibers.
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<StructureSection load='1rxl' size='340' side='right'caption='[[1rxl]]' scene=''>
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== Structural highlights ==
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==About this Structure==
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<table><tr><td colspan='2'>[[1rxl]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1RXL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1RXL FirstGlance]. <br>
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1RXL is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1RXL OCA].
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1rxl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1rxl OCA], [https://pdbe.org/1rxl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1rxl RCSB], [https://www.ebi.ac.uk/pdbsum/1rxl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1rxl ProSAT]</span></td></tr>
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==Reference==
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</table>
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An atomic resolution model for assembly, architecture, and function of the Dr adhesins., Anderson KL, Billington J, Pettigrew D, Cota E, Simpson P, Roversi P, Chen HA, Urvil P, du Merle L, Barlow PN, Medof ME, Smith RA, Nowicki B, Le Bouguenec C, Lea SM, Matthews S, Mol Cell. 2004 Aug 27;15(4):647-57. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15327779 15327779]
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== Function ==
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[https://www.uniprot.org/uniprot/AFAE3_ECOLX AFAE3_ECOLX] Hemagglutinins of uropathogenic E.coli mediate adherence to the upper urinary tract. These adhesins bind to the Dr blood group antigen and also agglutinate human erythrocytes in the presence of D-mannose (mannose-resistant hemagglutination (MRHA)).
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/rx/1rxl_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1rxl ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Anderson, K.L.]]
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[[Category: Anderson KL]]
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[[Category: Barlow, P.N.]]
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[[Category: Barlow PN]]
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[[Category: Billington, J.]]
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[[Category: Billington J]]
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[[Category: Bouguenec, C.Le.]]
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[[Category: Chen HA]]
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[[Category: Chen, H.A.]]
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[[Category: Cota E]]
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[[Category: Cota, E]]
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[[Category: Le Bouguenec C]]
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[[Category: Lea, S.M.]]
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[[Category: Lea SM]]
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[[Category: Matthews, S.]]
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[[Category: Matthews S]]
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[[Category: Medof, M.E.]]
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[[Category: Medof ME]]
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[[Category: Merle, L.du.]]
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[[Category: Nowicki B]]
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[[Category: Nowicki, B.]]
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[[Category: Pettigrew D]]
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[[Category: Pettigrew, D.]]
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[[Category: Roversi P]]
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[[Category: Roversi, P.]]
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[[Category: Simpson P]]
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[[Category: Simpson, P.]]
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[[Category: Smith RA]]
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[[Category: Smith, R.A.]]
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[[Category: Urvil P]]
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[[Category: Urvil, P.]]
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[[Category: Du Merle L]]
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[[Category: afae]]
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[[Category: afimbrial sheath]]
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[[Category: daec]]
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[[Category: daf]]
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[[Category: donor strand complemented]]
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[[Category: ig-like domain]]
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[[Category: nmr]]
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[[Category: upec]]
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''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 01:56:08 2007''
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Current revision

Solution structure of the engineered protein Afae-dsc

PDB ID 1rxl

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