This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1s7z

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:29, 1 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1s7z.png|left|200px]]
 
-
{{STRUCTURE_1s7z| PDB=1s7z | SCENE= }}
+
==Structure of Ocr from Bacteriophage T7==
-
 
+
<StructureSection load='1s7z' size='340' side='right'caption='[[1s7z]], [[Resolution|resolution]] 1.83&Aring;' scene=''>
-
===Structure of Ocr from Bacteriophage T7===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1s7z]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_phage_T7 Escherichia phage T7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S7Z OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S7Z FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_11804597}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.83&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CS:CESIUM+ION'>CS</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s7z FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s7z OCA], [https://pdbe.org/1s7z PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s7z RCSB], [https://www.ebi.ac.uk/pdbsum/1s7z PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s7z ProSAT]</span></td></tr>
-
[[1s7z]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterobacteria_phage_t7 Enterobacteria phage t7]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S7Z OCA].
+
</table>
-
 
+
== Function ==
-
==Reference==
+
[https://www.uniprot.org/uniprot/OCR_BPT7 OCR_BPT7]
-
<ref group="xtra">PMID:011804597</ref><references group="xtra"/>
+
== Evolutionary Conservation ==
-
[[Category: Enterobacteria phage t7]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: Atanasiu, C.]]
+
Check<jmol>
-
[[Category: Berg, T.]]
+
<jmolCheckbox>
-
[[Category: Dryden, D T.]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/s7/1s7z_consurf.spt"</scriptWhenChecked>
-
[[Category: Edwardson, J M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Henderson, R M.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Sturrock, S S.]]
+
</jmolCheckbox>
-
[[Category: Taylor, P.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1s7z ConSurf].
-
[[Category: Walkinshaw, M D.]]
+
<div style="clear:both"></div>
-
[[Category: All helical]]
+
__TOC__
-
[[Category: Gene regulation]]
+
</StructureSection>
 +
[[Category: Escherichia phage T7]]
 +
[[Category: Large Structures]]
 +
[[Category: Atanasiu C]]
 +
[[Category: Berg T]]
 +
[[Category: Dryden DT]]
 +
[[Category: Edwardson JM]]
 +
[[Category: Henderson RM]]
 +
[[Category: Sturrock SS]]
 +
[[Category: Taylor P]]
 +
[[Category: Walkinshaw MD]]

Current revision

Structure of Ocr from Bacteriophage T7

PDB ID 1s7z

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools