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1s9r

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{{Seed}}
 
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[[Image:1s9r.png|left|200px]]
 
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<!--
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==CRYSTAL STRUCTURE OF ARGININE DEIMINASE COVALENTLY LINKED WITH A REACTION INTERMEDIATE==
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The line below this paragraph, containing "STRUCTURE_1s9r", creates the "Structure Box" on the page.
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<StructureSection load='1s9r' size='340' side='right'caption='[[1s9r]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1s9r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Mycoplasmopsis_arginini Mycoplasmopsis arginini]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S9R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1S9R FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ARG:ARGININE'>ARG</scene>, <scene name='pdbligand=TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>TRS</scene>, <scene name='pdbligand=UNX:UNKNOWN+ATOM+OR+ION'>UNX</scene></td></tr>
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{{STRUCTURE_1s9r| PDB=1s9r | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1s9r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1s9r OCA], [https://pdbe.org/1s9r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1s9r RCSB], [https://www.ebi.ac.uk/pdbsum/1s9r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1s9r ProSAT]</span></td></tr>
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</table>
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===CRYSTAL STRUCTURE OF ARGININE DEIMINASE COVALENTLY LINKED WITH A REACTION INTERMEDIATE===
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== Function ==
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[https://www.uniprot.org/uniprot/ARCA_MYCAR ARCA_MYCAR]
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== Evolutionary Conservation ==
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<!--
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_15062088}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 15062088 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/s9/1s9r_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_15062088}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1S9R is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Mycoplasma_arginini Mycoplasma arginini]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1S9R OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1s9r ConSurf].
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<div style="clear:both"></div>
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==Reference==
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__TOC__
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Crystal structures of arginine deiminase with covalent reaction intermediates; implications for catalytic mechanism., Das K, Butler GH, Kwiatkowski V, Clark AD Jr, Yadav P, Arnold E, Structure. 2004 Apr;12(4):657-67. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15062088 15062088]
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</StructureSection>
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[[Category: Arginine deiminase]]
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[[Category: Large Structures]]
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[[Category: Mycoplasma arginini]]
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[[Category: Mycoplasmopsis arginini]]
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[[Category: Single protein]]
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[[Category: Arnold E]]
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[[Category: Arnold, E.]]
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[[Category: Buttler GH]]
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[[Category: Buttler, G H.]]
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[[Category: Clark Jr AD]]
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[[Category: Das, K.]]
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[[Category: Das K]]
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[[Category: Jr., A D.Clark.]]
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[[Category: Kwiatkowski V]]
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[[Category: Kwiatkowski, V.]]
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[[Category: Yadav P]]
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[[Category: Yadav, P.]]
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[[Category: 5-fold pseudo-symmetric domain]]
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[[Category: 5-helix bundle domain]]
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[[Category: Deiminase]]
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[[Category: Hydrolase]]
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[[Category: Raction intermediate]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 06:27:54 2008''
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Current revision

CRYSTAL STRUCTURE OF ARGININE DEIMINASE COVALENTLY LINKED WITH A REACTION INTERMEDIATE

PDB ID 1s9r

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