This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1sfs

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:31, 1 May 2024) (edit) (undo)
 
(14 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1sfs.gif|left|200px]]<br /><applet load="1sfs" size="350" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1sfs, resolution 1.07&Aring;" />
 
-
'''1.07 A crystal structure of an uncharacterized B. stearothermophilus protein'''<br />
 
-
==About this Structure==
+
==1.07 A crystal structure of an uncharacterized B. stearothermophilus protein==
-
1SFS is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus] with <scene name='pdbligand=PO4:'>PO4</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SFS OCA].
+
<StructureSection load='1sfs' size='340' side='right'caption='[[1sfs]], [[Resolution|resolution]] 1.07&Aring;' scene=''>
 +
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[1sfs]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Geobacillus_stearothermophilus Geobacillus stearothermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SFS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SFS FirstGlance]. <br>
 +
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.07&#8491;</td></tr>
 +
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sfs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sfs OCA], [https://pdbe.org/1sfs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sfs RCSB], [https://www.ebi.ac.uk/pdbsum/1sfs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sfs ProSAT], [https://www.topsan.org/Proteins/MCSG/1sfs TOPSAN]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/P84136_GEOSE P84136_GEOSE]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sf/1sfs_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sfs ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Geobacillus stearothermophilus]]
[[Category: Geobacillus stearothermophilus]]
-
[[Category: Single protein]]
+
[[Category: Large Structures]]
-
[[Category: Anderson, W F.]]
+
[[Category: Anderson WF]]
-
[[Category: Brunzelle, J S.]]
+
[[Category: Brunzelle JS]]
-
[[Category: Collart, F R.]]
+
[[Category: Collart FR]]
-
[[Category: MCSG, Midwest Center for Structural Genomics.]]
+
[[Category: Minasov G]]
-
[[Category: Minasov, G.]]
+
[[Category: Moy SF]]
-
[[Category: Moy, S F.]]
+
[[Category: Shuvalova L]]
-
[[Category: Shuvalova, L.]]
+
-
[[Category: PO4]]
+
-
[[Category: mcsg]]
+
-
[[Category: midwest center for structural genomics]]
+
-
[[Category: possible bacterial lysozyme]]
+
-
[[Category: protein structure initiative]]
+
-
[[Category: psi]]
+
-
[[Category: structural genomics]]
+
-
[[Category: unknown function]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:01:00 2008''
+

Current revision

1.07 A crystal structure of an uncharacterized B. stearothermophilus protein

PDB ID 1sfs

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools