This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1shq

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:32, 1 May 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
{{Seed}}
 
-
[[Image:1shq.png|left|200px]]
 
-
<!--
+
==Crystal structure of shrimp alkaline phosphatase with magnesium in M3==
-
The line below this paragraph, containing "STRUCTURE_1shq", creates the "Structure Box" on the page.
+
<StructureSection load='1shq' size='340' side='right'caption='[[1shq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1shq]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pandalus_borealis Pandalus borealis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SHQ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SHQ FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
-->
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
{{STRUCTURE_1shq| PDB=1shq | SCENE= }}
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1shq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1shq OCA], [https://pdbe.org/1shq PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1shq RCSB], [https://www.ebi.ac.uk/pdbsum/1shq PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1shq ProSAT]</span></td></tr>
 +
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9BHT8_PANBO Q9BHT8_PANBO]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sh/1shq_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1shq ConSurf].
 +
<div style="clear:both"></div>
-
===Crystal structure of shrimp alkaline phosphatase with magnesium in M3===
+
==See Also==
-
 
+
*[[Alkaline phosphatase 3D structures|Alkaline phosphatase 3D structures]]
-
 
+
__TOC__
-
<!--
+
</StructureSection>
-
The line below this paragraph, {{ABSTRACT_PUBMED_15333925}}, adds the Publication Abstract to the page
+
[[Category: Large Structures]]
-
(as it appears on PubMed at http://www.pubmed.gov), where 15333925 is the PubMed ID number.
+
-
-->
+
-
{{ABSTRACT_PUBMED_15333925}}
+
-
 
+
-
==About this Structure==
+
-
1SHQ is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pandalus_borealis Pandalus borealis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SHQ OCA].
+
-
 
+
-
==Reference==
+
-
<ref group="xtra">PMID:15333925</ref><references group="xtra"/>
+
-
[[Category: Alkaline phosphatase]]
+
[[Category: Pandalus borealis]]
[[Category: Pandalus borealis]]
-
[[Category: Backer, M M.E de.]]
+
[[Category: Hough E]]
-
[[Category: Hough, E.]]
+
[[Category: Lindley PF]]
-
[[Category: Lindley, P F.]]
+
[[Category: McSweeney S]]
-
[[Category: McSweeney, S.]]
+
[[Category: De Backer MME]]
-
[[Category: Alkaline phosphatase]]
+
-
[[Category: Beta sheet]]
+
-
[[Category: Cold-active]]
+
-
[[Category: Hydrolase]]
+
-
[[Category: Magnesium]]
+
-
[[Category: Metal exchange]]
+
-
[[Category: Metal triad]]
+
-
[[Category: Phosphomonoester]]
+
-
[[Category: Shrimp]]
+
-
[[Category: Zinc]]
+
-
 
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 14:20:06 2009''
+

Current revision

Crystal structure of shrimp alkaline phosphatase with magnesium in M3

PDB ID 1shq

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1shq"
Personal tools