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1sk3

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{{Seed}}
 
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[[Image:1sk3.png|left|200px]]
 
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==Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ialpha==
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The line below this paragraph, containing "STRUCTURE_1sk3", creates the "Structure Box" on the page.
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<StructureSection load='1sk3' size='340' side='right'caption='[[1sk3]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1sk3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SK3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SK3 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NI:NICKEL+(II)+ION'>NI</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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{{STRUCTURE_1sk3| PDB=1sk3 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sk3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sk3 OCA], [https://pdbe.org/1sk3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sk3 RCSB], [https://www.ebi.ac.uk/pdbsum/1sk3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sk3 ProSAT]</span></td></tr>
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</table>
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===Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ialpha===
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== Function ==
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[https://www.uniprot.org/uniprot/PGRP3_HUMAN PGRP3_HUMAN] Pattern receptor that binds to murein peptidoglycans (PGN) of Gram-positive bacteria. Has bactericidal activity towards Gram-positive bacteria. May kill Gram-positive bacteria by interfering with peptidoglycan biosynthesis. Binds also to Gram-negative bacteria, and has bacteriostatic activity towards Gram-negative bacteria. Plays a role in innate immunity.<ref>PMID:16354652</ref>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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The line below this paragraph, {{ABSTRACT_PUBMED_15140887}}, adds the Publication Abstract to the page
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Check<jmol>
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(as it appears on PubMed at http://www.pubmed.gov), where 15140887 is the PubMed ID number.
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sk/1sk3_consurf.spt"</scriptWhenChecked>
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{{ABSTRACT_PUBMED_15140887}}
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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==About this Structure==
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</jmolCheckbox>
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1SK3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SK3 OCA].
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sk3 ConSurf].
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<div style="clear:both"></div>
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==Reference==
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== References ==
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Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ialpha., Guan R, Malchiodi EL, Wang Q, Schuck P, Mariuzza RA, J Biol Chem. 2004 Jul 23;279(30):31873-82. Epub 2004 May 12. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15140887 15140887]
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Single protein]]
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[[Category: Large Structures]]
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[[Category: Guan, R.]]
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[[Category: Guan R]]
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[[Category: Malchiodi, E L.]]
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[[Category: Malchiodi EL]]
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[[Category: Mariuzza, R A.]]
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[[Category: Mariuzza RA]]
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[[Category: Qian, W.]]
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[[Category: Qian W]]
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[[Category: Schuck, P.]]
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[[Category: Schuck P]]
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[[Category: Alpha/beta mix]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jul 29 03:27:08 2008''
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Current revision

Crystal structure of the C-terminal peptidoglycan-binding domain of human peptidoglycan recognition protein Ialpha

PDB ID 1sk3

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