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1ti8

From Proteopedia

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{{Seed}}
 
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[[Image:1ti8.png|left|200px]]
 
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<!--
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==H7 Haemagglutinin==
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The line below this paragraph, containing "STRUCTURE_1ti8", creates the "Structure Box" on the page.
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<StructureSection load='1ti8' size='340' side='right'caption='[[1ti8]], [[Resolution|resolution]] 3.00&Aring;' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1ti8]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Influenza_A_virus Influenza A virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TI8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TI8 FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=NDG:2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE'>NDG</scene></td></tr>
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{{STRUCTURE_1ti8| PDB=1ti8 | SCENE= }}
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ti8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ti8 OCA], [https://pdbe.org/1ti8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ti8 RCSB], [https://www.ebi.ac.uk/pdbsum/1ti8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ti8 ProSAT]</span></td></tr>
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</table>
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== Function ==
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[https://www.uniprot.org/uniprot/Q6GYW3_9INFA Q6GYW3_9INFA] Binds to sialic acid-containing receptors on the cell surface, bringing about the attachment of the virus particle to the cell. This attachment induces virion internalization of about two third of the virus particles through clathrin-dependent endocytosis and about one third through a clathrin- and caveolin-independent pathway. Plays a major role in the determination of host range restriction and virulence. Class I viral fusion protein. Responsible for penetration of the virus into the cell cytoplasm by mediating the fusion of the membrane of the endocytosed virus particle with the endosomal membrane. Low pH in endosomes induces an irreversible conformational change in HA2, releasing the fusion hydrophobic peptide. Several trimers are required to form a competent fusion pore (By similarity).[RuleBase:RU003324][SAAS:SAAS013829_004_327643]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ti/1ti8_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ti8 ConSurf].
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<div style="clear:both"></div>
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===H7 Haemagglutinin===
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==See Also==
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*[[Hemagglutinin 3D structures|Hemagglutinin 3D structures]]
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__TOC__
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</StructureSection>
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The line below this paragraph, {{ABSTRACT_PUBMED_15246268}}, adds the Publication Abstract to the page
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[[Category: Influenza A virus]]
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(as it appears on PubMed at http://www.pubmed.gov), where 15246268 is the PubMed ID number.
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[[Category: Large Structures]]
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-->
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[[Category: Gamblin SJ]]
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{{ABSTRACT_PUBMED_15246268}}
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[[Category: Ha Y]]
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[[Category: Haire LF]]
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==About this Structure==
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[[Category: Russell RJ]]
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1TI8 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Influenza_a_virus Influenza a virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TI8 OCA].
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[[Category: Skehel JJ]]
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[[Category: Stevens DJ]]
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==Reference==
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[[Category: Xaio B]]
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<ref group="xtra">PMID:15246268</ref><references group="xtra"/>
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[[Category: Influenza a virus]]
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[[Category: Gamblin, S J.]]
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[[Category: Ha, Y.]]
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[[Category: Haire, L F.]]
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[[Category: Russell, R J.]]
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[[Category: Skehel, J J.]]
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[[Category: Stevens, D J.]]
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[[Category: Xaio, B.]]
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[[Category: H7]]
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[[Category: Haemagglutinin]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Feb 17 18:24:18 2009''
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Current revision

H7 Haemagglutinin

PDB ID 1ti8

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