This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1trh

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:43, 1 May 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1trh.png|left|200px]]
 
-
{{STRUCTURE_1trh| PDB=1trh | SCENE= }}
+
==TWO CONFORMATIONAL STATES OF CANDIDA RUGOSA LIPASE==
-
 
+
<StructureSection load='1trh' size='340' side='right'caption='[[1trh]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-
===TWO CONFORMATIONAL STATES OF CANDIDA RUGOSA LIPASE===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1trh]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Diutina_rugosa Diutina rugosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TRH OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1TRH FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_8142901}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1trh FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1trh OCA], [https://pdbe.org/1trh PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1trh RCSB], [https://www.ebi.ac.uk/pdbsum/1trh PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1trh ProSAT]</span></td></tr>
-
[[1trh]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Candida_rugosa Candida rugosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1TRH OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/LIP1_DIURU LIP1_DIURU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/tr/1trh_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1trh ConSurf].
 +
<div style="clear:both"></div>
==See Also==
==See Also==
-
*[[Lipase|Lipase]]
+
*[[Lipase 3D Structures|Lipase 3D Structures]]
-
*[[Lipase lid morph|Lipase lid morph]]
+
__TOC__
-
 
+
</StructureSection>
-
==Reference==
+
[[Category: Diutina rugosa]]
-
<ref group="xtra">PMID:008142901</ref><ref group="xtra">PMID:015597204</ref><references group="xtra"/>
+
[[Category: Large Structures]]
-
[[Category: Candida rugosa]]
+
[[Category: Cygler M]]
-
[[Category: Triacylglycerol lipase]]
+
[[Category: Grochulski P]]
-
[[Category: Cygler, M.]]
+
-
[[Category: Grochulski, P.]]
+

Current revision

TWO CONFORMATIONAL STATES OF CANDIDA RUGOSA LIPASE

PDB ID 1trh

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools