This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1u34

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1u34" size="450" color="white" frame="true" align="right" spinBox="true" caption="1u34" /> '''3D NMR structure of the first extracellular ...)
Current revision (08:46, 1 May 2024) (edit) (undo)
 
(15 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1u34.gif|left|200px]]<br /><applet load="1u34" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1u34" />
 
-
'''3D NMR structure of the first extracellular domain of CRFR-2beta, a type B1 G-protein coupled receptor'''<br />
 
-
==Overview==
+
==3D NMR structure of the first extracellular domain of CRFR-2beta, a type B1 G-protein coupled receptor==
-
The corticotropin-releasing factor (CRF) ligand family has diverse effects, on the CNS, including the modulation of the stress response. The ligands', effects are mediated by binding to CRF G protein-coupled receptors. We, have determined the 3D NMR structure of the N-terminal extracellular, domain (ECD1) of the mouse CRF receptor 2beta, which is the major ligand, recognition domain, and identified its ligand binding site by, chemical-shift perturbation experiments. The fold is identified as a short, consensus repeat (SCR), a common protein interaction module. Mutagenesis, reveals the integrity of the hormone-binding site in the full-length, receptor. This study proposes that the ECD1 captures the C-terminal, segment of the ligand, whose N terminus then penetrates into the, transmembrane region of the receptor to initiate signaling. Key residues, of SCR in the ECD1 are conserved in the G protein-coupled receptor, subfamily, suggesting the SCR fold in all of the ECD1s of this subfamily.
+
<StructureSection load='1u34' size='340' side='right'caption='[[1u34]]' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[1u34]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1U34 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1U34 FirstGlance]. <br>
-
1U34 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1U34 OCA].
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
 
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1u34 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1u34 OCA], [https://pdbe.org/1u34 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1u34 RCSB], [https://www.ebi.ac.uk/pdbsum/1u34 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1u34 ProSAT]</span></td></tr>
-
==Reference==
+
</table>
-
NMR structure and peptide hormone binding site of the first extracellular domain of a type B1 G protein-coupled receptor., Grace CR, Perrin MH, DiGruccio MR, Miller CL, Rivier JE, Vale WW, Riek R, Proc Natl Acad Sci U S A. 2004 Aug 31;101(35):12836-41. Epub 2004 Aug 23. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15326300 15326300]
+
== Function ==
 +
[https://www.uniprot.org/uniprot/CRFR2_MOUSE CRFR2_MOUSE] This is a receptor for corticotropin releasing factor. Shows high-affinity CRF binding. Also binds to urocortin I, II and III. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/u3/1u34_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1u34 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Single protein]]
+
[[Category: DiGruccio MR]]
-
[[Category: DiGruccio, M.R.]]
+
[[Category: Grace CR]]
-
[[Category: Grace, C.R.]]
+
[[Category: Miller CL]]
-
[[Category: Miller, C.L.]]
+
[[Category: Perrin MH]]
-
[[Category: Perrin, M.H.]]
+
[[Category: Riek R]]
-
[[Category: Riek, R.]]
+
[[Category: Rivier JE]]
-
[[Category: Rivier, J.E.]]
+
[[Category: Vale WW]]
-
[[Category: Vale, W.W.]]
+
-
[[Category: beta sheets and loops]]
+
-
 
+
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Wed Nov 21 03:48:54 2007''
+

Current revision

3D NMR structure of the first extracellular domain of CRFR-2beta, a type B1 G-protein coupled receptor

PDB ID 1u34

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools