This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2akk
From Proteopedia
(Difference between revisions)
| (13 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:2akk.gif|left|200px]] | ||
| - | + | ==Solution structure of phnA-like protein rp4479 from Rhodopseudomonas palustris== | |
| - | + | <StructureSection load='2akk' size='340' side='right'caption='[[2akk]]' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[2akk]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodopseudomonas_palustris_CGA009 Rhodopseudomonas palustris CGA009]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AKK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AKK FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2akk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2akk OCA], [https://pdbe.org/2akk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2akk RCSB], [https://www.ebi.ac.uk/pdbsum/2akk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2akk ProSAT], [https://www.topsan.org/Proteins/NESGC/2akk TOPSAN]</span></td></tr> | |
| - | + | </table> | |
| - | | | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/Q6N1A7_RHOPA Q6N1A7_RHOPA] | |
| - | + | == Evolutionary Conservation == | |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ak/2akk_consurf.spt"</scriptWhenChecked> | |
| - | == | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | + | <text>to colour the structure by Evolutionary Conservation</text> | |
| - | [[Category: | + | </jmolCheckbox> |
| - | [[Category: | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2akk ConSurf]. |
| - | [[Category: Arrowsmith | + | <div style="clear:both"></div> |
| - | [[Category: Edward | + | __TOC__ |
| - | [[Category: Kennedy | + | </StructureSection> |
| - | [[Category: Lemak | + | [[Category: Large Structures]] |
| - | + | [[Category: Rhodopseudomonas palustris CGA009]] | |
| - | + | [[Category: Arrowsmith CH]] | |
| - | [[Category: Ramelot | + | [[Category: Edward A]] |
| - | [[Category: Semesi | + | [[Category: Kennedy M]] |
| - | [[Category: Wu | + | [[Category: Lemak A]] |
| - | [[Category: Yee | + | [[Category: Ramelot TA]] |
| - | + | [[Category: Semesi A]] | |
| - | + | [[Category: Wu B]] | |
| - | + | [[Category: Yee A]] | |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Solution structure of phnA-like protein rp4479 from Rhodopseudomonas palustris
| |||||||||||
