This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2k5j
From Proteopedia
(Difference between revisions)
| (4 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| + | |||
==Solution structure of protein yiiF from Shigella flexneri serotype 5b (strain 8401) . Northeast Structural Genomics Consortium target sft1== | ==Solution structure of protein yiiF from Shigella flexneri serotype 5b (strain 8401) . Northeast Structural Genomics Consortium target sft1== | ||
| - | <StructureSection load='2k5j' size='340' side='right' caption='[[2k5j | + | <StructureSection load='2k5j' size='340' side='right'caption='[[2k5j]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2k5j]] is a 2 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2k5j]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Shigella_flexneri_5_str._8401 Shigella flexneri 5 str. 8401]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2K5J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2K5J FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2k5j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2k5j OCA], [https://pdbe.org/2k5j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2k5j RCSB], [https://www.ebi.ac.uk/pdbsum/2k5j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2k5j ProSAT], [https://www.topsan.org/Proteins/NESGC/2k5j TOPSAN]</span></td></tr> |
</table> | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/Q0SZ80_SHIF8 Q0SZ80_SHIF8] | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k5j_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/k5/2k5j_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
| Line 18: | Line 21: | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Large Structures]] |
| - | [[Category: | + | [[Category: Shigella flexneri 5 str. 8401]] |
| - | [[Category: | + | [[Category: Arrowsmith C]] |
| - | [[Category: | + | [[Category: Bansal S]] |
| - | [[Category: | + | [[Category: Montelione GT]] |
| - | [[Category: Prestegard | + | [[Category: Prestegard J]] |
| - | [[Category: Semesi | + | [[Category: Semesi A]] |
| - | [[Category: Singarapu | + | [[Category: Singarapu K]] |
| - | [[Category: Szyperski | + | [[Category: Szyperski T]] |
| - | [[Category: Wu | + | [[Category: Wu Y]] |
| - | [[Category: Yee | + | [[Category: Yee A]] |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Solution structure of protein yiiF from Shigella flexneri serotype 5b (strain 8401) . Northeast Structural Genomics Consortium target sft1
| |||||||||||
