This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2kks

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:48, 9 May 2024) (edit) (undo)
 
(12 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2kks.png|left|200px]]
 
-
<!--
+
==Solution Structure Of Protein DSY2949 From Desulfitobacterium hafniense. Northeast Structural Genomics Consortium Target DhR27==
-
The line below this paragraph, containing "STRUCTURE_2kks", creates the "Structure Box" on the page.
+
<StructureSection load='2kks' size='340' side='right'caption='[[2kks]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2kks]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfitobacterium_hafniense_Y51 Desulfitobacterium hafniense Y51]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KKS FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kks FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kks OCA], [https://pdbe.org/2kks PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kks RCSB], [https://www.ebi.ac.uk/pdbsum/2kks PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kks ProSAT], [https://www.topsan.org/Proteins/NESGC/2kks TOPSAN]</span></td></tr>
-
{{STRUCTURE_2kks| PDB=2kks | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Solution Structure Of Protein DSY2949 From Desulfitobacterium hafniense. Northeast Structural Genomics Consortium Target DhR27===
+
[https://www.uniprot.org/uniprot/Q24TA4_DESHY Q24TA4_DESHY]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
[[2kks]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfitobacterium_hafniense Desulfitobacterium hafniense]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKS OCA].
+
<jmolCheckbox>
-
[[Category: Desulfitobacterium hafniense]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kk/2kks_consurf.spt"</scriptWhenChecked>
-
[[Category: Acton, T.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Ciccosanti, C.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: Everett, J.]]
+
</jmolCheckbox>
-
[[Category: Jiang, M.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kks ConSurf].
-
[[Category: Mills, J L.]]
+
<div style="clear:both"></div>
-
[[Category: Montelione, G T.]]
+
__TOC__
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
</StructureSection>
-
[[Category: Nair, R.]]
+
[[Category: Desulfitobacterium hafniense Y51]]
-
[[Category: Rost, B.]]
+
[[Category: Large Structures]]
-
[[Category: Sukumaran, D.]]
+
[[Category: Acton T]]
-
[[Category: Swapna, G V.T.]]
+
[[Category: Ciccosanti C]]
-
[[Category: Szyperski, T.]]
+
[[Category: Everett J]]
-
[[Category: Wang, H.]]
+
[[Category: Jiang M]]
-
[[Category: Wu, Y.]]
+
[[Category: Mills JL]]
-
[[Category: Xiao, R.]]
+
[[Category: Montelione GT]]
-
[[Category: Zhang, Q.]]
+
[[Category: Nair R]]
-
[[Category: Nesg]]
+
[[Category: Rost B]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: Sukumaran D]]
-
[[Category: Protein structure initiative]]
+
[[Category: Swapna GVT]]
-
[[Category: Psi-2]]
+
[[Category: Szyperski T]]
-
[[Category: Structural genomic]]
+
[[Category: Wang H]]
-
[[Category: Unknown function]]
+
[[Category: Wu Y]]
 +
[[Category: Xiao R]]
 +
[[Category: Zhang Q]]

Current revision

Solution Structure Of Protein DSY2949 From Desulfitobacterium hafniense. Northeast Structural Genomics Consortium Target DhR27

PDB ID 2kks

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2kks"
Personal tools