This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2w4u

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:08, 9 May 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
==Isometrically contracting insect asynchronous flight muscle quick frozen after a length step==
==Isometrically contracting insect asynchronous flight muscle quick frozen after a length step==
-
<StructureSection load='2w4u' size='340' side='right' caption='[[2w4u]], [[Resolution|resolution]] 35.00&Aring;' scene=''>
+
<SX load='2w4u' size='340' side='right' viewer='molstar' caption='[[2w4u]], [[Resolution|resolution]] 35.00&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2w4u]] is a 36 chain structure with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus] and [http://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4U OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2W4U FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2w4u]] is a 36 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus] and [https://en.wikipedia.org/wiki/Oryctolagus_cuniculus Oryctolagus cuniculus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2W4U OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2W4U FirstGlance]. <br>
-
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1tnq|1tnq]], [[2aso|2aso]], [[1wua|1wua]], [[1o18|1o18]], [[2d1k|2d1k]], [[1ncx|1ncx]], [[1ew7|1ew7]], [[2a5x|2a5x]], [[2v52|2v52]], [[1j6z|1j6z]], [[1npq|1npq]], [[1atn|1atn]], [[1ytz|1ytz]], [[1s22|1s22]], [[1t44|1t44]], [[1zac|1zac]], [[2ff6|2ff6]], [[1o1f|1o1f]], [[2tma|2tma]], [[1blq|1blq]], [[1jc2|1jc2]], [[1o19|1o19]], [[1o1e|1o1e]], [[1p8z|1p8z]], [[1o1c|1o1c]], [[2vcp|2vcp]], [[1o1g|1o1g]], [[1vdi|1vdi]], [[1qz6|1qz6]], [[1avs|1avs]], [[1lcu|1lcu]], [[2a42|2a42]], [[1top|1top]], [[1ijj|1ijj]], [[1o1a|1o1a]], [[1tnx|1tnx]], [[1m8q|1m8q]], [[1uy5|1uy5]], [[1rfq|1rfq]], [[1ma9|1ma9]], [[1rdw|1rdw]], [[1o1b|1o1b]], [[1o1d|1o1d]], [[1ncy|1ncy]], [[2a40|2a40]], [[1qz5|1qz5]], [[1nwk|1nwk]], [[1smg|1smg]], [[1sqk|1sqk]], [[1tnp|1tnp]], [[1pon|1pon]], [[1tnw|1tnw]], [[2ff3|2ff3]], [[1mvw|1mvw]], [[1eqy|1eqy]], [[2fxu|2fxu]], [[2v51|2v51]], [[1kxp|1kxp]], [[2asp|2asp]], [[2d3e|2d3e]], [[1rgi|1rgi]], [[1y64|1y64]], [[1ncz|1ncz]], [[1alm|1alm]]</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 35&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2w4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4u OCA], [http://pdbe.org/2w4u PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2w4u RCSB], [http://www.ebi.ac.uk/pdbsum/2w4u PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2w4u ProSAT]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2w4u FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2w4u OCA], [https://pdbe.org/2w4u PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2w4u RCSB], [https://www.ebi.ac.uk/pdbsum/2w4u PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2w4u ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/TPM1_RABIT TPM1_RABIT]] Binds to actin filaments in muscle and non-muscle cells. Plays a central role, in association with the troponin complex, in the calcium dependent regulation of vertebrate striated muscle contraction. Smooth muscle contraction is regulated by interaction with caldesmon. In non-muscle cells is implicated in stabilizing cytoskeleton actin filaments. [[http://www.uniprot.org/uniprot/TNNC2_CHICK TNNC2_CHICK]] Troponin is the central regulatory protein of striated muscle contraction. Tn consists of three components: Tn-I which is the inhibitor of actomyosin ATPase, Tn-T which contains the binding site for tropomyosin and Tn-C. The binding of calcium to Tn-C abolishes the inhibitory action of Tn on actin filaments. [[http://www.uniprot.org/uniprot/TNNI2_CHICK TNNI2_CHICK]] Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity. [[http://www.uniprot.org/uniprot/TNNT3_CHICK TNNT3_CHICK]] Troponin T is the tropomyosin-binding subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity. [[http://www.uniprot.org/uniprot/ACTS_RABIT ACTS_RABIT]] Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells.
+
[https://www.uniprot.org/uniprot/TNNC2_CHICK TNNC2_CHICK] Troponin is the central regulatory protein of striated muscle contraction. Tn consists of three components: Tn-I which is the inhibitor of actomyosin ATPase, Tn-T which contains the binding site for tropomyosin and Tn-C. The binding of calcium to Tn-C abolishes the inhibitory action of Tn on actin filaments.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w4/2w4u_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/w4/2w4u_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 30: Line 30:
==See Also==
==See Also==
-
*[[Tropomyosin|Tropomyosin]]
+
*[[Tropomyosin 3D structures|Tropomyosin 3D structures]]
-
*[[Troponin|Troponin]]
+
*[[Troponin 3D structures|Troponin 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
-
</StructureSection>
+
</SX>
[[Category: Gallus gallus]]
[[Category: Gallus gallus]]
 +
[[Category: Large Structures]]
[[Category: Oryctolagus cuniculus]]
[[Category: Oryctolagus cuniculus]]
-
[[Category: Franzini-Armstrong, C]]
+
[[Category: Franzini-Armstrong C]]
-
[[Category: Goldman, Y E]]
+
[[Category: Goldman YE]]
-
[[Category: Liu, J]]
+
[[Category: Liu J]]
-
[[Category: Lucaveche, C]]
+
[[Category: Lucaveche C]]
-
[[Category: Reedy, M C]]
+
[[Category: Reedy MC]]
-
[[Category: Reedy, M K]]
+
[[Category: Reedy MK]]
-
[[Category: Sasaki, H]]
+
[[Category: Sasaki H]]
-
[[Category: Taylor, K A]]
+
[[Category: Taylor KA]]
-
[[Category: Tregear, R T]]
+
[[Category: Tregear RT]]
-
[[Category: Winkler, H]]
+
[[Category: Winkler H]]
-
[[Category: Wu, S]]
+
[[Category: Wu S]]
-
[[Category: Actin-binding]]
+
-
[[Category: Atp-binding]]
+
-
[[Category: Calmodulin-binding]]
+
-
[[Category: Contractile protein]]
+
-
[[Category: Freeze substitution]]
+
-
[[Category: Isometric contraction]]
+
-
[[Category: Methylation]]
+
-
[[Category: Microtomy]]
+
-
[[Category: Motor protein]]
+
-
[[Category: Muscle protein]]
+

Current revision

Isometrically contracting insect asynchronous flight muscle quick frozen after a length step

2w4u, resolution 35.00Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools