This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2x4l

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:21, 9 May 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
-
==CRYSTAL STRUCTURE OF DESE, A FERRIC-SIDEROPHORE RECEPTOR PROTEIN FROM STREPTOMYCES COELICOLOR==
+
 
-
<StructureSection load='2x4l' size='340' side='right' caption='[[2x4l]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
+
==Crystal structure of DesE, a ferric-siderophore receptor protein from Streptomyces coelicolor==
 +
<StructureSection load='2x4l' size='340' side='right'caption='[[2x4l]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2x4l]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptomyces_coelicolor Streptomyces coelicolor]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X4L OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2X4L FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2x4l]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptomyces_coelicolor_A3(2) Streptomyces coelicolor A3(2)]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X4L OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2X4L FirstGlance]. <br>
-
</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2x4l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x4l OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2x4l RCSB], [http://www.ebi.ac.uk/pdbsum/2x4l PDBsum]</span></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2x4l FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x4l OCA], [https://pdbe.org/2x4l PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2x4l RCSB], [https://www.ebi.ac.uk/pdbsum/2x4l PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2x4l ProSAT]</span></td></tr>
</table>
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q9L074_STRCO Q9L074_STRCO]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x4/2x4l_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x4/2x4l_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
</jmolCheckbox>
</jmolCheckbox>
-
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2x4l ConSurf].
<div style="clear:both"></div>
<div style="clear:both"></div>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 23: Line 27:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2x4l" style="background-color:#fffaf0;"></div>
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Streptomyces coelicolor]]
+
[[Category: Large Structures]]
-
[[Category: Carter, L G.]]
+
[[Category: Carter LG]]
-
[[Category: Johnson, K A.]]
+
[[Category: Johnson KA]]
-
[[Category: Liu, H.]]
+
[[Category: Liu H]]
-
[[Category: Mcmahon, S A.]]
+
[[Category: Mcmahon SA]]
-
[[Category: Naismith, J H.]]
+
[[Category: Naismith JH]]
-
[[Category: Oke, M.]]
+
[[Category: Oke M]]
-
[[Category: White, M F.]]
+
[[Category: White MF]]
-
[[Category: Transport]]
+

Current revision

Crystal structure of DesE, a ferric-siderophore receptor protein from Streptomyces coelicolor

PDB ID 2x4l

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools