4x8i

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (11:29, 9 May 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==de novo crystal structure of the Pyrococcus Furiosus TET3 aminopeptidase==
==de novo crystal structure of the Pyrococcus Furiosus TET3 aminopeptidase==
-
<StructureSection load='4x8i' size='340' side='right' caption='[[4x8i]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
+
<StructureSection load='4x8i' size='340' side='right'caption='[[4x8i]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[4x8i]] is a 3 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X8I OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4X8I FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[4x8i]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4X8I OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4X8I FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=DO3:10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE+1,4,7-TRIACETIC+ACID'>DO3</scene>, <scene name='pdbligand=GD:GADOLINIUM+ATOM'>GD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Aminopeptidase_Y Aminopeptidase Y], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.11.15 3.4.11.15] </span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=CO:COBALT+(II)+ION'>CO</scene>, <scene name='pdbligand=DO3:10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE+1,4,7-TRIACETIC+ACID'>DO3</scene>, <scene name='pdbligand=GD:GADOLINIUM+ATOM'>GD</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4x8i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x8i OCA], [http://pdbe.org/4x8i PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=4x8i RCSB], [http://www.ebi.ac.uk/pdbsum/4x8i PDBsum]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4x8i FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4x8i OCA], [https://pdbe.org/4x8i PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4x8i RCSB], [https://www.ebi.ac.uk/pdbsum/4x8i PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4x8i ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/AMPK_PYRFU AMPK_PYRFU]] Hydrolyzes di-, tri- and tetrapeptides with a lysine as the N-terminal amino acid and with Gly, Lys, Ala, Phe or Glu in the second position.
+
[https://www.uniprot.org/uniprot/AMPK_PYRFU AMPK_PYRFU] Hydrolyzes di-, tri- and tetrapeptides with a lysine as the N-terminal amino acid and with Gly, Lys, Ala, Phe or Glu in the second position.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 19: Line 19:
</div>
</div>
<div class="pdbe-citations 4x8i" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 4x8i" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Aminopeptidase 3D structures|Aminopeptidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Aminopeptidase Y]]
+
[[Category: Large Structures]]
-
[[Category: Colombo, M]]
+
[[Category: Pyrococcus furiosus]]
-
[[Category: Aminopeptidase]]
+
[[Category: Colombo M]]
-
[[Category: Hydrolase]]
+

Current revision

de novo crystal structure of the Pyrococcus Furiosus TET3 aminopeptidase

PDB ID 4x8i

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools