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5abf

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==Structure of GH84 with ligand==
==Structure of GH84 with ligand==
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<StructureSection load='5abf' size='340' side='right' caption='[[5abf]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
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<StructureSection load='5abf' size='340' side='right'caption='[[5abf]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[5abf]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ABF OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5ABF FirstGlance]. <br>
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<table><tr><td colspan='2'>[[5abf]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=5ABF OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=5ABF FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=XRJ:2-[(2S,3R,4R,5R)-5-(HYDROXYMETHYL)-3,4-BIS(OXIDANYL)-1-PENTYL-PYRROLIDIN-2-YL]-N-METHYL-ETHANAMIDE'>XRJ</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[5abe|5abe]], [[5abg|5abg]], [[5abh|5abh]]</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=XRJ:2-[(2S,3R,4R,5R)-5-(HYDROXYMETHYL)-3,4-BIS(OXIDANYL)-1-PENTYL-PYRROLIDIN-2-YL]-N-METHYL-ETHANAMIDE'>XRJ</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Protein_O-GlcNAcase Protein O-GlcNAcase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.169 3.2.1.169] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=5abf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5abf OCA], [https://pdbe.org/5abf PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=5abf RCSB], [https://www.ebi.ac.uk/pdbsum/5abf PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=5abf ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=5abf FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=5abf OCA], [http://pdbe.org/5abf PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=5abf RCSB], [http://www.ebi.ac.uk/pdbsum/5abf PDBsum]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/OGA_BACTN OGA_BACTN]] Biological function unknown. Capable of hydrolyzing the glycosidic link of O-GlcNAcylated proteins.
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[https://www.uniprot.org/uniprot/OGA_BACTN OGA_BACTN] Biological function unknown. Capable of hydrolyzing the glycosidic link of O-GlcNAcylated proteins.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 5abf" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 5abf" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[O-GlcNAcase|O-GlcNAcase]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Protein O-GlcNAcase]]
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[[Category: Bacteroides thetaiotaomicron]]
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[[Category: Bergeron-Brlek, M]]
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[[Category: Large Structures]]
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[[Category: Britton, R]]
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[[Category: Bergeron-Brlek M]]
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[[Category: Cekic, N]]
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[[Category: Britton R]]
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[[Category: Chan, S]]
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[[Category: Cekic N]]
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[[Category: Davies, G J]]
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[[Category: Chan S]]
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[[Category: Goodwin-Tindall, J]]
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[[Category: Davies GJ]]
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[[Category: Roth, C]]
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[[Category: Goodwin-Tindall J]]
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[[Category: Shan, X]]
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[[Category: Roth C]]
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[[Category: Varghese, V]]
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[[Category: Shan X]]
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[[Category: Vocadlo, D J]]
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[[Category: Varghese V]]
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[[Category: Zandberg, W F]]
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[[Category: Vocadlo DJ]]
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[[Category: Hydrolase]]
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[[Category: Zandberg WF]]
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[[Category: Inhibitor]]
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[[Category: Tim-barrel]]
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Current revision

Structure of GH84 with ligand

PDB ID 5abf

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