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6g8b

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Current revision (12:34, 9 May 2024) (edit) (undo)
 
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==E. coli Aminopeptidase N solved by Native SAD from a dataset collected in 60 second with JUNGFRAU detector==
==E. coli Aminopeptidase N solved by Native SAD from a dataset collected in 60 second with JUNGFRAU detector==
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<StructureSection load='6g8b' size='340' side='right' caption='[[6g8b]], [[Resolution|resolution]] 2.37&Aring;' scene=''>
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<StructureSection load='6g8b' size='340' side='right'caption='[[6g8b]], [[Resolution|resolution]] 2.37&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6g8b]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Ecoli Ecoli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G8B OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6G8B FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6g8b]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli_K-12 Escherichia coli K-12]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6G8B OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6G8B FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=7MF:[(7~{S})-1-BROMANYL-6,6-BIS(OXIDANYL)-4-PHENYL-5,7,8,9-TETRAHYDROBENZO[7]ANNULEN-7-YL]AZANIUM'>7MF</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.374&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">pepN, b0932, JW0915 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=83333 ECOLI])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=7MF:[(7~{S})-1-BROMANYL-6,6-BIS(OXIDANYL)-4-PHENYL-5,7,8,9-TETRAHYDROBENZO[7]ANNULEN-7-YL]AZANIUM'>7MF</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Membrane_alanyl_aminopeptidase Membrane alanyl aminopeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.11.2 3.4.11.2] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6g8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g8b OCA], [https://pdbe.org/6g8b PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6g8b RCSB], [https://www.ebi.ac.uk/pdbsum/6g8b PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6g8b ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6g8b FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6g8b OCA], [http://pdbe.org/6g8b PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6g8b RCSB], [http://www.ebi.ac.uk/pdbsum/6g8b PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6g8b ProSAT]</span></td></tr>
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</table>
</table>
== Function ==
== Function ==
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[[http://www.uniprot.org/uniprot/AMPN_ECOLI AMPN_ECOLI]] Aminopeptidase N is involved in the degradation of intracellular peptides generated by protein breakdown during normal growth as well as in response to nutrient starvation.
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[https://www.uniprot.org/uniprot/AMPN_ECOLI AMPN_ECOLI] Aminopeptidase N is involved in the degradation of intracellular peptides generated by protein breakdown during normal growth as well as in response to nutrient starvation.
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6g8b" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6g8b" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Aminopeptidase 3D structures|Aminopeptidase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Ecoli]]
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[[Category: Escherichia coli K-12]]
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[[Category: Membrane alanyl aminopeptidase]]
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[[Category: Large Structures]]
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[[Category: Leonarski, F]]
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[[Category: Leonarski F]]
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[[Category: Olieric, V]]
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[[Category: Olieric V]]
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[[Category: Redford, S]]
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[[Category: Redford S]]
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[[Category: Wang, M]]
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[[Category: Wang M]]
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[[Category: Hydrolase]]
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[[Category: Integrating detector]]
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[[Category: Jungfrau]]
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[[Category: Native-sad]]
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Current revision

E. coli Aminopeptidase N solved by Native SAD from a dataset collected in 60 second with JUNGFRAU detector

PDB ID 6g8b

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