This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1wgb

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (13:37, 9 May 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1wgb.png|left|200px]]
 
-
{{STRUCTURE_1wgb| PDB=1wgb | SCENE= }}
+
==Crystal structure of a probable flavoprotein from Thermus thermophilus HB8==
-
 
+
<StructureSection load='1wgb' size='340' side='right'caption='[[1wgb]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-
===Crystal structure of a probable flavoprotein from Thermus thermophilus HB8===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1wgb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WGB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WGB FirstGlance]. <br>
-
{{ABSTRACT_PUBMED_022052907}}
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-
 
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wgb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wgb OCA], [https://pdbe.org/1wgb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wgb RCSB], [https://www.ebi.ac.uk/pdbsum/1wgb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wgb ProSAT], [https://www.topsan.org/Proteins/RSGI/1wgb TOPSAN]</span></td></tr>
-
[[1wgb]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WGB OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/Q72LK7_THET2 Q72LK7_THET2]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wg/1wgb_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wgb ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Thermus thermophilus]]
[[Category: Thermus thermophilus]]
-
[[Category: Imagawa, T.]]
+
[[Category: Imagawa T]]
-
[[Category: Kuramitsu, S.]]
+
[[Category: Kuramitsu S]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Tsuge H]]
-
[[Category: Tsuge, H.]]
+
[[Category: Utsunomiya H]]
-
[[Category: Utsunomiya, H.]]
+
[[Category: Yokoyama S]]
-
[[Category: Yokoyama, S.]]
+
-
[[Category: Flavoprotein]]
+
-
[[Category: Hb8]]
+
-
[[Category: Oxidoreductase]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+

Current revision

Crystal structure of a probable flavoprotein from Thermus thermophilus HB8

PDB ID 1wgb

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools