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1wzm
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="1wzm" size="450" color="white" frame="true" align="right" spinBox="true" caption="1wzm, resolution 3.20Å" /> '''Thermoactinomyces vu...) |
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| - | [[Image:1wzm.gif|left|200px]]<br /><applet load="1wzm" size="450" color="white" frame="true" align="right" spinBox="true" | ||
| - | caption="1wzm, resolution 3.20Å" /> | ||
| - | '''Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) mutatnt R469K'''<br /> | ||
| - | == | + | ==Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) mutatnt R469K== |
| - | + | <StructureSection load='1wzm' size='340' side='right'caption='[[1wzm]], [[Resolution|resolution]] 3.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | [ | + | <table><tr><td colspan='2'>[[1wzm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermoactinomyces_vulgaris Thermoactinomyces vulgaris]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1WZM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1WZM FirstGlance]. <br> |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 3.2Å</td></tr> | |
| - | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene></td></tr> | |
| - | [ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1wzm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1wzm OCA], [https://pdbe.org/1wzm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1wzm RCSB], [https://www.ebi.ac.uk/pdbsum/1wzm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1wzm ProSAT]</span></td></tr> |
| - | [ | + | </table> |
| - | [ | + | == Function == |
| - | + | [https://www.uniprot.org/uniprot/NEPU2_THEVU NEPU2_THEVU] Hydrolyzes pullulan efficiently but only a small amount of starch. Endohydrolysis of 1,4-alpha-glucosidic linkages in pullulan to form panose. Cleaves also (1-6)-alpha-glucosidic linkages to form maltotriose. | |
| - | [[ | + | == Evolutionary Conservation == |
| - | + | [[Image:Consurf_key_small.gif|200px|right]] | |
| - | + | Check<jmol> | |
| - | + | <jmolCheckbox> | |
| - | [ | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/wz/1wzm_consurf.spt"</scriptWhenChecked> |
| - | [[ | + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> |
| - | [ | + | <text>to colour the structure by Evolutionary Conservation</text> |
| - | + | </jmolCheckbox> | |
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1wzm ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| - | + | ==See Also== | |
| + | *[[Amylase 3D structures|Amylase 3D structures]] | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
| + | [[Category: Large Structures]] | ||
| + | [[Category: Thermoactinomyces vulgaris]] | ||
| + | [[Category: Ichikawa K]] | ||
| + | [[Category: Kamitori S]] | ||
| + | [[Category: Mizuno M]] | ||
| + | [[Category: Nishikawa A]] | ||
| + | [[Category: Ohtaki A]] | ||
| + | [[Category: Sakano Y]] | ||
| + | [[Category: Shimura Y]] | ||
| + | [[Category: Tonozuka T]] | ||
Current revision
Thermoactinomyces vulgaris R-47 alpha-amylase II (TVA II) mutatnt R469K
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