This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1x5o

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:00, 9 May 2024) (edit) (undo)
 
(2 intermediate revisions not shown.)
Line 1: Line 1:
==Solution structure of RRM domain in RNA binding motif, single-stranded interacting protein 1==
==Solution structure of RRM domain in RNA binding motif, single-stranded interacting protein 1==
-
<StructureSection load='1x5o' size='340' side='right' caption='[[1x5o]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='1x5o' size='340' side='right'caption='[[1x5o]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[1x5o]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Human Human]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X5O OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1X5O FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[1x5o]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X5O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X5O FirstGlance]. <br>
-
</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RBMS1, MSSP, MSSP1, SCR2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 HUMAN])</td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1x5o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x5o OCA], [http://pdbe.org/1x5o PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1x5o RCSB], [http://www.ebi.ac.uk/pdbsum/1x5o PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=1x5o ProSAT], [http://www.topsan.org/Proteins/RSGI/1x5o TOPSAN]</span></td></tr>
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x5o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x5o OCA], [https://pdbe.org/1x5o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x5o RCSB], [https://www.ebi.ac.uk/pdbsum/1x5o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x5o ProSAT], [https://www.topsan.org/Proteins/RSGI/1x5o TOPSAN]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/RBMS1_HUMAN RBMS1_HUMAN]] Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication.
+
[https://www.uniprot.org/uniprot/RBMS1_HUMAN RBMS1_HUMAN] Single-stranded DNA binding protein that interacts with the region upstream of the MYC gene. Binds specifically to the DNA sequence motif 5'-[AT]CT[AT][AT]T-3'. Probably has a role in DNA replication.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Line 21: Line 21:
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Human]]
+
[[Category: Homo sapiens]]
-
[[Category: Dang, W]]
+
[[Category: Large Structures]]
-
[[Category: Inoue, M]]
+
[[Category: Dang W]]
-
[[Category: Kigawa, T]]
+
[[Category: Inoue M]]
-
[[Category: Muto, Y]]
+
[[Category: Kigawa T]]
-
[[Category: Structural genomic]]
+
[[Category: Muto Y]]
-
[[Category: Shirouzu, M]]
+
[[Category: Shirouzu M]]
-
[[Category: Terada, T]]
+
[[Category: Terada T]]
-
[[Category: Yokoyama, S]]
+
[[Category: Yokoyama S]]
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Rna binding protein]]
+
-
[[Category: Rrm domain]]
+
-
[[Category: Rsgi]]
+

Current revision

Solution structure of RRM domain in RNA binding motif, single-stranded interacting protein 1

PDB ID 1x5o

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools