This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1x5y

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (14:01, 9 May 2024) (edit) (undo)
 
(8 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1x5y.png|left|200px]]
 
-
{{STRUCTURE_1x5y| PDB=1x5y | SCENE= }}
+
==Solution structure of the fibronectin type-III domain of mouse myosin-binding protein C, Fast-type homolog==
-
 
+
<StructureSection load='1x5y' size='340' side='right'caption='[[1x5y]]' scene=''>
-
===Solution structure of the fibronectin type-III domain of mouse myosin-binding protein C, Fast-type homolog===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1x5y]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X5Y OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1X5Y FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1x5y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1x5y OCA], [https://pdbe.org/1x5y PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1x5y RCSB], [https://www.ebi.ac.uk/pdbsum/1x5y PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1x5y ProSAT], [https://www.topsan.org/Proteins/RSGI/1x5y TOPSAN]</span></td></tr>
-
[[1x5y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1X5Y OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/MYPC2_MOUSE MYPC2_MOUSE] Thick filament-associated protein located in the crossbridge region of vertebrate striated muscle a bands. In vitro it binds MHC, F-actin and native thin filaments, and modifies the activity of actin-activated myosin ATPase. It may modulate muscle contraction or may play a more structural role (By similarity).
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/x5/1x5y_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1x5y ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: Inoue, M.]]
+
[[Category: Inoue M]]
-
[[Category: Kigawa, T.]]
+
[[Category: Kigawa T]]
-
[[Category: Koshiba, S.]]
+
[[Category: Koshiba S]]
-
[[Category: RSGI, RIKEN Structural Genomics/Proteomics Initiative.]]
+
[[Category: Tochio N]]
-
[[Category: Tochio, N.]]
+
[[Category: Yokoyama S]]
-
[[Category: Yokoyama, S.]]
+
[[Category: Yoneyama M]]
-
[[Category: Yoneyama, M.]]
+
-
[[Category: Cell adhesion]]
+
-
[[Category: Cytoskeleton]]
+
-
[[Category: Fast mybp-c]]
+
-
[[Category: Fibronectin type iii domain containing protein]]
+
-
[[Category: Muscle contraction]]
+
-
[[Category: National project on protein structural and functional analyse]]
+
-
[[Category: Nppsfa]]
+
-
[[Category: Riken structural genomics/proteomics initiative]]
+
-
[[Category: Rsgi]]
+
-
[[Category: Structural genomic]]
+

Current revision

Solution structure of the fibronectin type-III domain of mouse myosin-binding protein C, Fast-type homolog

PDB ID 1x5y

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools