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1xe8

From Proteopedia

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==Crystal structure of the YML079w protein from Saccharomyces cerevisiae reveals a new sequence family of the jelly roll fold.==
==Crystal structure of the YML079w protein from Saccharomyces cerevisiae reveals a new sequence family of the jelly roll fold.==
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<StructureSection load='1xe8' size='340' side='right' caption='[[1xe8]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
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<StructureSection load='1xe8' size='340' side='right'caption='[[1xe8]], [[Resolution|resolution]] 2.80&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1xe8]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_18824 Atcc 18824]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XE8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1XE8 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1xe8]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XE8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XE8 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.8&#8491;</td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADE:ADENINE'>ADE</scene>, <scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1xe7|1xe7]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xe8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xe8 OCA], [https://pdbe.org/1xe8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xe8 RCSB], [https://www.ebi.ac.uk/pdbsum/1xe8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xe8 ProSAT]</span></td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">YML079w ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=4932 ATCC 18824])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1xe8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xe8 OCA], [http://pdbe.org/1xe8 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=1xe8 RCSB], [http://www.ebi.ac.uk/pdbsum/1xe8 PDBsum]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/YMH9_YEAST YMH9_YEAST]
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xe/1xe8_consurf.spt"</scriptWhenChecked>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xe/1xe8_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
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__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 18824]]
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[[Category: Large Structures]]
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[[Category: Collinet, B]]
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[[Category: Saccharomyces cerevisiae]]
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[[Category: Graille, M]]
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[[Category: Collinet B]]
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[[Category: Janin, J]]
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[[Category: Graille M]]
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[[Category: Leulliot, N]]
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[[Category: Janin J]]
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[[Category: Meyer, P]]
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[[Category: Leulliot N]]
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[[Category: Quevillon-Cheruel, S]]
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[[Category: Li de La Sierra-Gallay I]]
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[[Category: Sierra-Gallay, I Li de La]]
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[[Category: Meyer P]]
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[[Category: Sorel, I]]
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[[Category: Quevillon-Cheruel S]]
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[[Category: Tilbeurgh, H Van]]
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[[Category: Sorel I]]
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[[Category: Zhou, C Z]]
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[[Category: Van Tilbeurgh H]]
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[[Category: Cupin superfamily]]
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[[Category: Zhou C-Z]]
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[[Category: Jelly roll motif]]
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[[Category: S. cerevisiae]]
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[[Category: Structural genomic]]
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[[Category: Unknown function]]
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[[Category: Yml079wp]]
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Current revision

Crystal structure of the YML079w protein from Saccharomyces cerevisiae reveals a new sequence family of the jelly roll fold.

PDB ID 1xe8

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OCA

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