This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2l1n

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:38, 15 May 2024) (edit) (undo)
 
(10 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2l1n.png|left|200px]]
 
-
<!--
+
==Solution NMR structure of the protein YP_399305.1==
-
The line below this paragraph, containing "STRUCTURE_2l1n", creates the "Structure Box" on the page.
+
<StructureSection load='2l1n' size='340' side='right'caption='[[2l1n]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[2l1n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Synechococcus_elongatus_PCC_7942_=_FACHB-805 Synechococcus elongatus PCC 7942 = FACHB-805]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L1N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2L1N FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2l1n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l1n OCA], [https://pdbe.org/2l1n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2l1n RCSB], [https://www.ebi.ac.uk/pdbsum/2l1n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2l1n ProSAT]</span></td></tr>
-
{{STRUCTURE_2l1n| PDB=2l1n | SCENE= }}
+
</table>
-
 
+
== Function ==
-
===Solution NMR structure of the protein YP_399305.1===
+
[https://www.uniprot.org/uniprot/Q31RK1_SYNE7 Q31RK1_SYNE7]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
[[2l1n]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Synechococcus_elongatus Synechococcus elongatus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L1N OCA].
+
<jmolCheckbox>
-
[[Category: Synechococcus elongatus]]
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l1/2l1n_consurf.spt"</scriptWhenChecked>
-
[[Category: Geralt, M.]]
+
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-
[[Category: Horst, R.]]
+
<text>to colour the structure by Evolutionary Conservation</text>
-
[[Category: JCSG, Joint Center for Structural Genomics.]]
+
</jmolCheckbox>
-
[[Category: Mohanty, B.]]
+
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2l1n ConSurf].
-
[[Category: Serrano, P.]]
+
<div style="clear:both"></div>
-
[[Category: Wuthrich, K.]]
+
__TOC__
-
[[Category: Cyanobacteria]]
+
</StructureSection>
-
[[Category: Duf1823]]
+
[[Category: Large Structures]]
-
[[Category: Hypothetical protein]]
+
[[Category: Synechococcus elongatus PCC 7942 = FACHB-805]]
-
[[Category: Jcsg]]
+
[[Category: Geralt M]]
-
[[Category: Joint center for structural genomic]]
+
[[Category: Horst R]]
-
[[Category: Protein structure initiative]]
+
[[Category: Mohanty B]]
-
[[Category: Psi-biology]]
+
[[Category: Serrano P]]
-
[[Category: Structural genomic]]
+
[[Category: Wuthrich K]]
-
[[Category: Unknown function]]
+

Current revision

Solution NMR structure of the protein YP_399305.1

PDB ID 2l1n

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2l1n"
Personal tools