This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2l1v

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (05:38, 15 May 2024) (edit) (undo)
 
(5 intermediate revisions not shown.)
Line 1: Line 1:
 +
==Solution structure of a preQ1 riboswitch (Class I) aptamer bound to preQ1==
==Solution structure of a preQ1 riboswitch (Class I) aptamer bound to preQ1==
-
<StructureSection load='2l1v' size='340' side='right' caption='[[2l1v]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2l1v' size='340' side='right'caption='[[2l1v]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2l1v]] is a 1 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2kfc 2kfc]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L1V OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2L1V FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2l1v]] is a 1 chain structure. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=2kfc 2kfc]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2L1V OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2L1V FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PRF:7-DEAZA-7-AMINOMETHYL-GUANINE'>PRF</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2l1v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l1v OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2l1v RCSB], [http://www.ebi.ac.uk/pdbsum/2l1v PDBsum]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=PRF:7-DEAZA-7-AMINOMETHYL-GUANINE'>PRF</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2l1v FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2l1v OCA], [https://pdbe.org/2l1v PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2l1v RCSB], [https://www.ebi.ac.uk/pdbsum/2l1v PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2l1v ProSAT]</span></td></tr>
</table>
</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
Line 14: Line 16:
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
 +
<div class="pdbe-citations 2l1v" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Riboswitch 3D structures|Riboswitch 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Feigon, J]]
+
[[Category: Large Structures]]
-
[[Category: Kang, M]]
+
[[Category: Feigon J]]
-
[[Category: Zhang, Q]]
+
[[Category: Kang M]]
-
[[Category: Aptamer]]
+
[[Category: Zhang Q]]
-
[[Category: Preq1]]
+
-
[[Category: Pseudoknot]]
+
-
[[Category: Riboswitch]]
+
-
[[Category: Rna]]
+

Current revision

Solution structure of a preQ1 riboswitch (Class I) aptamer bound to preQ1

PDB ID 2l1v

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools