This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1y43
From Proteopedia
(Difference between revisions)
| (9 intermediate revisions not shown.) | |||
| Line 1: | Line 1: | ||
| - | [[Image:1y43.png|left|200px]] | ||
| - | + | ==crystal structure of aspergilloglutamic peptidase from Aspergillus niger== | |
| - | + | <StructureSection load='1y43' size='340' side='right'caption='[[1y43]], [[Resolution|resolution]] 1.40Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[1y43]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Aspergillus_niger_var._macrosporus Aspergillus niger var. macrosporus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Y43 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Y43 FirstGlance]. <br> | |
| - | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.4Å</td></tr> | |
| - | == | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> |
| - | [[1y43]] is a 2 chain structure | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1y43 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1y43 OCA], [https://pdbe.org/1y43 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1y43 RCSB], [https://www.ebi.ac.uk/pdbsum/1y43 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1y43 ProSAT]</span></td></tr> |
| + | </table> | ||
| + | == Function == | ||
| + | [https://www.uniprot.org/uniprot/PRTA_ASPNG PRTA_ASPNG] | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/y4/1y43_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1y43 ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
==See Also== | ==See Also== | ||
*[[Pepsin|Pepsin]] | *[[Pepsin|Pepsin]] | ||
| - | + | __TOC__ | |
| + | </StructureSection> | ||
[[Category: Aspergillus niger var. macrosporus]] | [[Category: Aspergillus niger var. macrosporus]] | ||
| - | [[Category: Iwata | + | [[Category: Large Structures]] |
| - | [[Category: Kojima | + | [[Category: Iwata S]] |
| - | [[Category: Kubota | + | [[Category: Kojima M]] |
| - | [[Category: Muramatsu | + | [[Category: Kubota K]] |
| - | [[Category: Nakagawa | + | [[Category: Muramatsu T]] |
| - | [[Category: Sasaki | + | [[Category: Nakagawa A]] |
| - | [[Category: Sawano | + | [[Category: Sasaki H]] |
| - | [[Category: Suganuma | + | [[Category: Sawano Y]] |
| - | [[Category: Takahashi | + | [[Category: Suganuma M]] |
| - | + | [[Category: Takahashi K]] | |
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
crystal structure of aspergilloglutamic peptidase from Aspergillus niger
| |||||||||||

