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1yd4

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Current revision (08:02, 15 May 2024) (edit) (undo)
 
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<StructureSection load='1yd4' size='340' side='right'caption='[[1yd4]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
<StructureSection load='1yd4' size='340' side='right'caption='[[1yd4]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[1yd4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Atcc_43589 Atcc 43589]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YD4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YD4 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[1yd4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YD4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YD4 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat"><div style='overflow: auto; max-height: 3em;'>[[1ln0|1ln0]], [[1mk0|1mk0]], [[1kft|1kft]], [[1d9x|1d9x]], [[1ycz|1ycz]], [[1yd0|1yd0]], [[1yd1|1yd1]], [[1yd2|1yd2]], [[1yd3|1yd3]], [[1yd5|1yd5]], [[1yd6|1yd6]]</div></td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yd4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yd4 OCA], [https://pdbe.org/1yd4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yd4 RCSB], [https://www.ebi.ac.uk/pdbsum/1yd4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yd4 ProSAT]</span></td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yd4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yd4 OCA], [https://pdbe.org/1yd4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yd4 RCSB], [https://www.ebi.ac.uk/pdbsum/1yd4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yd4 ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
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[[https://www.uniprot.org/uniprot/UVRC_THEMA UVRC_THEMA]] The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision (By similarity).
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[https://www.uniprot.org/uniprot/UVRC_THEMA UVRC_THEMA] The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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==See Also==
==See Also==
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*[[UvrABC|UvrABC]]
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*[[UvrABC 3D structures|UvrABC 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Atcc 43589]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Croteau, D L]]
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[[Category: Thermotoga maritima]]
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[[Category: DellaVecchia, M J]]
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[[Category: Croteau DL]]
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[[Category: Houten, B Van]]
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[[Category: DellaVecchia MJ]]
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[[Category: Karakas, E]]
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[[Category: Karakas E]]
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[[Category: Kisker, C]]
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[[Category: Kisker C]]
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[[Category: Rhau, B]]
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[[Category: Rhau B]]
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[[Category: Skorvaga, M]]
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[[Category: Skorvaga M]]
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[[Category: Truglio, J J]]
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[[Category: Truglio JJ]]
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[[Category: Wang, H]]
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[[Category: Van Houten B]]
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[[Category: Wang, L]]
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[[Category: Wang H]]
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[[Category: Dna binding protein]]
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[[Category: Wang L]]

Current revision

Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Thermotoga maritima: Point mutant Y29F bound to its catalytic divalent cation

PDB ID 1yd4

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