This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1yue
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
<StructureSection load='1yue' size='340' side='right'caption='[[1yue]], [[Resolution|resolution]] 2.90Å' scene=''> | <StructureSection load='1yue' size='340' side='right'caption='[[1yue]], [[Resolution|resolution]] 2.90Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[1yue]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[1yue]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_virus_T4 Escherichia virus T4]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YUE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YUE FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9Å</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yue FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yue OCA], [https://pdbe.org/1yue PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yue RCSB], [https://www.ebi.ac.uk/pdbsum/1yue PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yue ProSAT]</span></td></tr> |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/CAPSP_BPT4 CAPSP_BPT4] Capsid protein that self-associates to form 11 pentons, building the T=13 laevo capsid in association with 160 hexamers of gp23* and one dodecamer of gp20.<ref>PMID:11162794</ref> <ref>PMID:15071181</ref> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 29: | Line 29: | ||
</div> | </div> | ||
<div class="pdbe-citations 1yue" style="background-color:#fffaf0;"></div> | <div class="pdbe-citations 1yue" style="background-color:#fffaf0;"></div> | ||
| - | |||
| - | ==See Also== | ||
| - | *[[Retractions and Fraud|Retractions and Fraud]] | ||
== References == | == References == | ||
<references/> | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| - | [[Category: | + | [[Category: Escherichia virus T4]] |
[[Category: Large Structures]] | [[Category: Large Structures]] | ||
| - | [[Category: Ahvazi | + | [[Category: Ahvazi B]] |
| - | [[Category: Black | + | [[Category: Black LW]] |
| - | [[Category: Boeshans | + | [[Category: Boeshans KM]] |
| - | [[Category: Fokine | + | [[Category: Fokine A]] |
| - | [[Category: Leiman | + | [[Category: Leiman PG]] |
| - | [[Category: Mesyanzhinov | + | [[Category: Mesyanzhinov VV]] |
| - | [[Category: Rossmann | + | [[Category: Rossmann MG]] |
| - | [[Category: Shneider | + | [[Category: Shneider MM]] |
| - | [[Category: Steven | + | [[Category: Steven AC]] |
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
| - | + | ||
Current revision
Bacteriophage T4 capsid vertex protein gp24
| |||||||||||

