This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1yww

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (08:07, 15 May 2024) (edit) (undo)
 
(11 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1yww.gif|left|200px]]
 
-
<!--
+
==NMR structure of P. aeruginosa protein PA4738: Northeast Structural Genomics Consortium target PaP2==
-
The line below this paragraph, containing "STRUCTURE_1yww", creates the "Structure Box" on the page.
+
<StructureSection load='1yww' size='340' side='right'caption='[[1yww]]' scene=''>
-
You may change the PDB parameter (which sets the PDB file loaded into the applet)
+
== Structural highlights ==
-
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+
<table><tr><td colspan='2'>[[1yww]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YWW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1YWW FirstGlance]. <br>
-
or leave the SCENE parameter empty for the default display.
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
-->
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1yww FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1yww OCA], [https://pdbe.org/1yww PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1yww RCSB], [https://www.ebi.ac.uk/pdbsum/1yww PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1yww ProSAT], [https://www.topsan.org/Proteins/NESGC/1yww TOPSAN]</span></td></tr>
-
{{STRUCTURE_1yww| PDB=1yww | SCENE= }}
+
</table>
-
 
+
== Function ==
-
'''NMR structure of P. aeruginosa protein PA4738: Northeast Structural Genomics Consortium target PaP2'''
+
[https://www.uniprot.org/uniprot/Y4738_PSEAE Y4738_PSEAE]
-
 
+
== Evolutionary Conservation ==
-
 
+
[[Image:Consurf_key_small.gif|200px|right]]
-
==About this Structure==
+
Check<jmol>
-
1YWW is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa Pseudomonas aeruginosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1YWW OCA].
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yw/1yww_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1yww ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pseudomonas aeruginosa]]
[[Category: Pseudomonas aeruginosa]]
-
[[Category: Single protein]]
+
[[Category: Cort JR]]
-
[[Category: Cort, J R.]]
+
[[Category: Kennedy MA]]
-
[[Category: Kennedy, M A.]]
+
[[Category: Montelione GT]]
-
[[Category: Montelione, G T.]]
+
[[Category: Ni S]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
-
[[Category: Ni, S.]]
+
-
[[Category: Nesg]]
+
-
[[Category: Northeast structural genomics consortium]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Yjbj]]
+
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Sat May 3 16:54:02 2008''
+

Current revision

NMR structure of P. aeruginosa protein PA4738: Northeast Structural Genomics Consortium target PaP2

PDB ID 1yww

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/1yww"
Personal tools