1eze

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[[Image:1eze.gif|left|200px]]
 
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==STRUCTURAL STUDIES OF A BABOON (PAPIO SP.) PLASMA PROTEIN INHIBITOR OF CHOLESTERYL ESTER TRANSFERASE.==
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The line below this paragraph, containing "STRUCTURE_1eze", creates the "Structure Box" on the page.
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<StructureSection load='1eze' size='340' side='right'caption='[[1eze]]' scene=''>
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You may change the PDB parameter (which sets the PDB file loaded into the applet)
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== Structural highlights ==
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or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
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<table><tr><td colspan='2'>[[1eze]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Papio_hamadryas Papio hamadryas]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EZE OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1EZE FirstGlance]. <br>
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or leave the SCENE parameter empty for the default display.
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1eze FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1eze OCA], [https://pdbe.org/1eze PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1eze RCSB], [https://www.ebi.ac.uk/pdbsum/1eze PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1eze ProSAT]</span></td></tr>
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{{STRUCTURE_1eze| PDB=1eze | SCENE= }}
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</table>
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== Function ==
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'''STRUCTURAL STUDIES OF A BABOON (PAPIO SP.) PLASMA PROTEIN INHIBITOR OF CHOLESTERYL ESTER TRANSFERASE.'''
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[https://www.uniprot.org/uniprot/APO1B_PAPHA APO1B_PAPHA] CETIP is an inhibitor of cholesteryl ester transferase.
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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==Overview==
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ez/1eze_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1eze ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
A 38-residue protein associated with cholesteryl ester transfer inhibition has been identified in baboons (Papio sp.). The cholesteryl ester transfer inhibitor protein (CETIP) corresponds to the N-terminus of baboon apoC-I. Relative to CETIP, baboon apoC-I is a weak inhibitor of baboon cholesteryl ester transferase (CET). To study the structural features responsible for CET inhibition, CETIP was synthesized by solid-phase methods. Using sodium dodecyl sulfate (SDS) to model the lipoprotein environment, the solution structure of CETIP was probed by optical and 1H NMR spectroscopy. Circular dichroism data show that the protein lacks a well-defined structure in water but, upon the addition of SDS, becomes helical (56%). A small blue shift of 8 nm was observed in the intrinsic tryptophan fluorescence of CETIP in the presence of saturating amounts of SDS, suggesting that tryptophan-23 is not buried deeply in the lipid environment. The helical nature of CETIP in the presence of SDS was confirmed by upfield 1Halpha secondary shifts and an average solution structure determined by distance geometry/simulated annealing calculations using 476 NOE-based distance restraints. The backbone (N-Calpha-C=O) root-mean-square deviation of an ensemble of 17 out of 25 calculated structures superimposed on the average structure was 1.06+0.30 A using residues V4-P35 and 0.51+/-0.17 A using residues A7-S32. Although the side-chain orientations fit the basic description of a class A amphipathic helix, both intramolecular salt bridge formation and "snorkeling" of basic side chains toward the polar face play minor, if any, roles in stabilizing the lipid-bound amphipathic structure. Conformational features of the calculated structures for CETIP are discussed relative to models of CETIP inhibition of cholesteryl ester transferase.
A 38-residue protein associated with cholesteryl ester transfer inhibition has been identified in baboons (Papio sp.). The cholesteryl ester transfer inhibitor protein (CETIP) corresponds to the N-terminus of baboon apoC-I. Relative to CETIP, baboon apoC-I is a weak inhibitor of baboon cholesteryl ester transferase (CET). To study the structural features responsible for CET inhibition, CETIP was synthesized by solid-phase methods. Using sodium dodecyl sulfate (SDS) to model the lipoprotein environment, the solution structure of CETIP was probed by optical and 1H NMR spectroscopy. Circular dichroism data show that the protein lacks a well-defined structure in water but, upon the addition of SDS, becomes helical (56%). A small blue shift of 8 nm was observed in the intrinsic tryptophan fluorescence of CETIP in the presence of saturating amounts of SDS, suggesting that tryptophan-23 is not buried deeply in the lipid environment. The helical nature of CETIP in the presence of SDS was confirmed by upfield 1Halpha secondary shifts and an average solution structure determined by distance geometry/simulated annealing calculations using 476 NOE-based distance restraints. The backbone (N-Calpha-C=O) root-mean-square deviation of an ensemble of 17 out of 25 calculated structures superimposed on the average structure was 1.06+0.30 A using residues V4-P35 and 0.51+/-0.17 A using residues A7-S32. Although the side-chain orientations fit the basic description of a class A amphipathic helix, both intramolecular salt bridge formation and "snorkeling" of basic side chains toward the polar face play minor, if any, roles in stabilizing the lipid-bound amphipathic structure. Conformational features of the calculated structures for CETIP are discussed relative to models of CETIP inhibition of cholesteryl ester transferase.
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==About this Structure==
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Structural studies of a baboon (Papio sp.) plasma protein inhibitor of cholesteryl ester transferase.,Buchko GW, Rozek A, Kanda P, Kennedy MA, Cushley RJ Protein Sci. 2000 Aug;9(8):1548-58. PMID:10975576<ref>PMID:10975576</ref>
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1EZE is a [[Single protein]] structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1EZE OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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Structural studies of a baboon (Papio sp.) plasma protein inhibitor of cholesteryl ester transferase., Buchko GW, Rozek A, Kanda P, Kennedy MA, Cushley RJ, Protein Sci. 2000 Aug;9(8):1548-58. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/10975576 10975576]
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</div>
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[[Category: Single protein]]
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<div class="pdbe-citations 1eze" style="background-color:#fffaf0;"></div>
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[[Category: Buchko, G W.]]
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== References ==
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[[Category: Cushley, R J.]]
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<references/>
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[[Category: Kanda, P.]]
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__TOC__
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[[Category: Kennedy, M A.]]
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</StructureSection>
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[[Category: Rozek, A.]]
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[[Category: Large Structures]]
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[[Category: Amphipathic helix]]
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[[Category: Papio hamadryas]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Fri May 2 15:42:09 2008''
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[[Category: Buchko GW]]
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[[Category: Cushley RJ]]
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[[Category: Kanda P]]
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[[Category: Kennedy MA]]
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[[Category: Rozek A]]

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STRUCTURAL STUDIES OF A BABOON (PAPIO SP.) PLASMA PROTEIN INHIBITOR OF CHOLESTERYL ESTER TRANSFERASE.

PDB ID 1eze

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