This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1j6r

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
(New page: 200px<br /><applet load="1j6r" size="450" color="white" frame="true" align="right" spinBox="true" caption="1j6r, resolution 2.30&Aring;" /> '''Crystal structure of...)
Current revision (08:36, 22 May 2024) (edit) (undo)
 
(16 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:1j6r.gif|left|200px]]<br /><applet load="1j6r" size="450" color="white" frame="true" align="right" spinBox="true"
 
-
caption="1j6r, resolution 2.30&Aring;" />
 
-
'''Crystal structure of Activation (AdoMet binding) domain of Methionine synthase (TM0269) from Thermotoga maritima at 2.2 A resolution'''<br />
 
-
==About this Structure==
+
==Crystal structure of Activation (AdoMet binding) domain of Methionine synthase (TM0269) from Thermotoga maritima at 2.2 A resolution==
-
1J6R is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Active as [http://en.wikipedia.org/wiki/Methionine_synthase Methionine synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.13 2.1.1.13] Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1J6R OCA].
+
<StructureSection load='1j6r' size='340' side='right'caption='[[1j6r]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
-
[[Category: Methionine synthase]]
+
== Structural highlights ==
-
[[Category: Single protein]]
+
<table><tr><td colspan='2'>[[1j6r]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1J6R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1J6R FirstGlance]. <br>
-
[[Category: Thermotoga maritima]]
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-
[[Category: JCSG, Joint.Center.for.Structural.Genomics.]]
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1j6r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1j6r OCA], [https://pdbe.org/1j6r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1j6r RCSB], [https://www.ebi.ac.uk/pdbsum/1j6r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1j6r ProSAT], [https://www.topsan.org/Proteins/JCSG/1j6r TOPSAN]</span></td></tr>
-
[[Category: activation (adomet binding) domain of methionine synthase]]
+
</table>
-
[[Category: jcsg]]
+
== Function ==
-
[[Category: joint center for structural genomics]]
+
[https://www.uniprot.org/uniprot/Q9WYA6_THEMA Q9WYA6_THEMA]
-
[[Category: protein structure initiative]]
+
== Evolutionary Conservation ==
-
[[Category: psi]]
+
[[Image:Consurf_key_small.gif|200px|right]]
-
[[Category: structural genomics]]
+
Check<jmol>
-
[[Category: tm0269]]
+
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/j6/1j6r_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1j6r ConSurf].
 +
<div style="clear:both"></div>
-
''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sat Nov 24 23:11:14 2007''
+
==See Also==
 +
*[[Methionine synthase 3D structures|Methionine synthase 3D structures]]
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
 +
[[Category: Thermotoga maritima]]

Current revision

Crystal structure of Activation (AdoMet binding) domain of Methionine synthase (TM0269) from Thermotoga maritima at 2.2 A resolution

PDB ID 1j6r

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools