This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2aqc

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:23, 22 May 2024) (edit) (undo)
 
(4 intermediate revisions not shown.)
Line 1: Line 1:
 +
==NMR Structural analysis of archaeal Nop10==
==NMR Structural analysis of archaeal Nop10==
-
<StructureSection load='2aqc' size='340' side='right' caption='[[2aqc]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
+
<StructureSection load='2aqc' size='340' side='right'caption='[[2aqc]]' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[2aqc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Atcc_43067 Atcc 43067]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2AQC FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[2aqc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2AQC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2AQC FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2aqc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aqc OCA], [http://pdbe.org/2aqc PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2aqc RCSB], [http://www.ebi.ac.uk/pdbsum/2aqc PDBsum]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2aqc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2aqc OCA], [https://pdbe.org/2aqc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2aqc RCSB], [https://www.ebi.ac.uk/pdbsum/2aqc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2aqc ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/NOP10_METJA NOP10_METJA]] Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA (By similarity).
+
[https://www.uniprot.org/uniprot/NOP10_METJA NOP10_METJA] Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA (By similarity).
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
Check<jmol>
<jmolCheckbox>
<jmolCheckbox>
-
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/2aqc_consurf.spt"</scriptWhenChecked>
+
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/aq/2aqc_consurf.spt"</scriptWhenChecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
<text>to colour the structure by Evolutionary Conservation</text>
<text>to colour the structure by Evolutionary Conservation</text>
Line 27: Line 29:
</div>
</div>
<div class="pdbe-citations 2aqc" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 2aqc" style="background-color:#fffaf0;"></div>
 +
 +
==See Also==
 +
*[[Ribosome biogenesis protein 3D structures|Ribosome biogenesis protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
-
[[Category: Atcc 43067]]
+
[[Category: Large Structures]]
-
[[Category: Amare, A R.Ferre-D]]
+
[[Category: Methanocaldococcus jannaschii]]
-
[[Category: Hamma, T]]
+
[[Category: Ferre-D'Amare AR]]
-
[[Category: Reichow, S L]]
+
[[Category: Hamma T]]
-
[[Category: Varani, G]]
+
[[Category: Reichow SL]]
-
[[Category: Anop10]]
+
[[Category: Varani G]]
-
[[Category: Rna binding protein]]
+
-
[[Category: Zinc-ribbon]]
+

Current revision

NMR Structural analysis of archaeal Nop10

PDB ID 2aqc

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/2aqc"
Personal tools