This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2koj

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (09:40, 22 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2koj.png|left|200px]]
 
-
{{STRUCTURE_2koj| PDB=2koj | SCENE= }}
+
==Solution structure of mouse Par-3 PDZ2 (residues 450-558)==
-
 
+
<StructureSection load='2koj' size='340' side='right'caption='[[2koj]]' scene=''>
-
===Solution structure of mouse Par-3 PDZ2 (residues 450-558)===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2koj]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KOJ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KOJ FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2koj FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2koj OCA], [https://pdbe.org/2koj PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2koj RCSB], [https://www.ebi.ac.uk/pdbsum/2koj PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2koj ProSAT]</span></td></tr>
-
[[2koj]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Mus_musculus Mus musculus]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KOJ OCA].
+
</table>
 +
== Function ==
 +
[https://www.uniprot.org/uniprot/PARD3_MOUSE PARD3_MOUSE] Adapter protein involved in asymmetrical cell division and cell polarization processes. Seems to play a central role in the formation of epithelial tight junctions. Targets the phosphatase PTEN to cell junctions. Association with PARD6B may prevent the interaction of PARD3 with F11R/JAM1, thereby preventing tight junction assembly. The PARD6-PARD3 complex links GTP-bound Rho small GTPases to atypical protein kinase C proteins. Required for establishment of neuronal polarity and normal axon formation in cultured hippocampal neurons (By similarity). Involved in Schwann cell peripheral myelination.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ko/2koj_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2koj ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Mus musculus]]
[[Category: Mus musculus]]
-
[[Category: CESG, Center for Eukaryotic Structural Genomics.]]
+
[[Category: Peterson FC]]
-
[[Category: Peterson, F C.]]
+
[[Category: Tyler RC]]
-
[[Category: Tyler, R C.]]
+
[[Category: Volkman BF]]
-
[[Category: Volkman, B F.]]
+
-
[[Category: Cell cycle]]
+
-
[[Category: Cell division]]
+
-
[[Category: Cell junction]]
+
-
[[Category: Center for eukaryotic structural genomic]]
+
-
[[Category: Cesg]]
+
-
[[Category: Cytoskeleton]]
+
-
[[Category: Membrane]]
+
-
[[Category: Par-3]]
+
-
[[Category: Pdz domain]]
+
-
[[Category: Phosphoprotein]]
+
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Signaling protein]]
+
-
[[Category: Structural genomic]]
+
-
[[Category: Tight junction]]
+

Current revision

Solution structure of mouse Par-3 PDZ2 (residues 450-558)

PDB ID 2koj

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools