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| | ==Type I rat fatty acid synthase acyl carrier protein (ACP) domain== | | ==Type I rat fatty acid synthase acyl carrier protein (ACP) domain== |
| - | <StructureSection load='2png' size='340' side='right' caption='[[2png]], [[NMR_Ensembles_of_Models | 30 NMR models]]' scene=''> | + | <StructureSection load='2png' size='340' side='right'caption='[[2png]]' scene=''> |
| | == Structural highlights == | | == Structural highlights == |
| - | <table><tr><td colspan='2'>[[2png]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Buffalo_rat Buffalo rat]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1n8l 1n8l]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PNG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2PNG FirstGlance]. <br> | + | <table><tr><td colspan='2'>[[2png]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=1n8l 1n8l]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PNG OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PNG FirstGlance]. <br> |
| - | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1n8l|1n8l]]</td></tr> | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Fasn ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=10116 Buffalo rat])</td></tr>
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2png OCA], [https://pdbe.org/2png PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2png RCSB], [https://www.ebi.ac.uk/pdbsum/2png PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2png ProSAT]</span></td></tr> |
| - | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Fatty-acid_synthase Fatty-acid synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.1.85 2.3.1.85] </span></td></tr>
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| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2png FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2png OCA], [http://pdbe.org/2png PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=2png RCSB], [http://www.ebi.ac.uk/pdbsum/2png PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=2png ProSAT]</span></td></tr> | + | |
| | </table> | | </table> |
| | == Function == | | == Function == |
| - | [[http://www.uniprot.org/uniprot/FAS_RAT FAS_RAT]] Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein. | + | [https://www.uniprot.org/uniprot/FAS_RAT FAS_RAT] Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein. |
| | == Evolutionary Conservation == | | == Evolutionary Conservation == |
| | [[Image:Consurf_key_small.gif|200px|right]] | | [[Image:Consurf_key_small.gif|200px|right]] |
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| | ==See Also== | | ==See Also== |
| - | *[[Fatty acid synthase|Fatty acid synthase]] | + | *[[Fatty acid synthase 3D structures|Fatty acid synthase 3D structures]] |
| | == References == | | == References == |
| | <references/> | | <references/> |
| | __TOC__ | | __TOC__ |
| | </StructureSection> | | </StructureSection> |
| - | [[Category: Buffalo rat]] | + | [[Category: Large Structures]] |
| - | [[Category: Fatty-acid synthase]] | + | [[Category: Rattus norvegicus]] |
| - | [[Category: Arthur, C J]] | + | [[Category: Arthur CJ]] |
| - | [[Category: Crosby, J]] | + | [[Category: Crosby J]] |
| - | [[Category: Crump, M P]] | + | [[Category: Crump MP]] |
| - | [[Category: Evans, S E]] | + | [[Category: Evans SE]] |
| - | [[Category: Ploskon, E A]] | + | [[Category: Ploskon EA]] |
| - | [[Category: Williams, C]] | + | [[Category: Williams C]] |
| - | [[Category: Acyl carrier protein]]
| + | |
| - | [[Category: Fatty acid synthase]]
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| - | [[Category: Helical bundle]]
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| - | [[Category: Transferase]]
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| Structural highlights
Function
FAS_RAT Fatty acid synthetase catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH. This multifunctional protein has 7 catalytic activities and an acyl carrier protein.
Evolutionary Conservation
Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.
Publication Abstract from PubMed
The synthases that produce fatty acids in mammals (FASs) are arranged as large multidomain polypeptides. The growing fatty acid chain is bound covalently during chain elongation and reduction to the acyl carrier protein (ACP) domain that is then able to access each catalytic site. In this work we report the high-resolution nuclear magnetic resonance (NMR) solution structure of the isolated rat fatty acid synthase apoACP domain. The final ensemble of NMR structures and backbone (15)N relaxation studies show that apoACP adopts a single, well defined fold. On conversion to the holo form, several small chemical shift changes are observed on the ACP for residues surrounding the phosphopantetheine attachment site (as monitored by backbone (1)H-(15)N correlation experiments). However, there are negligible chemical shift changes when the holo form is modified to either the hexanoyl or palmitoyl forms. For further NMR analysis, a (13)C,(15)N-labeled hexanoyl-ACP sample was prepared and full chemical shift assignments completed. Analysis of two-dimensional F(2)-filtered and three-dimensional (13)C-edited nuclear Overhauser effect spectroscopy experiments revealed no detectable NOEs to the acyl chain. These experiments demonstrate that unlike other FAS ACPs studied, this Type I ACP does not sequester a covalently linked acyl moiety, although transient interactions cannot be ruled out. This is an important mechanistic difference between the ACPs from Type I and Type II FASs and may be significant for the modulation and regulation of these important mega-synthases.
A mammalian type I fatty acid synthase acyl carrier protein domain does not sequester acyl chains.,Ploskon E, Arthur CJ, Evans SE, Williams C, Crosby J, Simpson TJ, Crump MP J Biol Chem. 2008 Jan 4;283(1):518-28. Epub 2007 Oct 30. PMID:17971456[1]
From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.
See Also
References
- ↑ Ploskon E, Arthur CJ, Evans SE, Williams C, Crosby J, Simpson TJ, Crump MP. A mammalian type I fatty acid synthase acyl carrier protein domain does not sequester acyl chains. J Biol Chem. 2008 Jan 4;283(1):518-28. Epub 2007 Oct 30. PMID:17971456 doi:10.1074/jbc.M703454200
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