2ql0
From Proteopedia
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==Zinc-substituted Rubredoxin from Desulfovibrio Vulgaris== | ==Zinc-substituted Rubredoxin from Desulfovibrio Vulgaris== | ||
| - | <StructureSection load='2ql0' size='340' side='right' caption='[[2ql0 | + | <StructureSection load='2ql0' size='340' side='right'caption='[[2ql0]]' scene=''> |
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[2ql0]] is a 1 chain structure with sequence from [ | + | <table><tr><td colspan='2'>[[2ql0]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Desulfovibrio_vulgaris Desulfovibrio vulgaris]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2QL0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2QL0 FirstGlance]. <br> |
| - | </td></tr><tr id=' | + | </td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr> |
| - | <tr id=' | + | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ql0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ql0 OCA], [https://pdbe.org/2ql0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ql0 RCSB], [https://www.ebi.ac.uk/pdbsum/2ql0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ql0 ProSAT]</span></td></tr> | |
| - | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[ | + | |
</table> | </table> | ||
== Function == | == Function == | ||
| - | [ | + | [https://www.uniprot.org/uniprot/RUBR_DESVH RUBR_DESVH] Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule. Electron acceptor for cytoplasmic lactate dehydrogenase. |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Check<jmol> | Check<jmol> | ||
<jmolCheckbox> | <jmolCheckbox> | ||
| - | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ql/2ql0_consurf.spt"</scriptWhenChecked> | + | <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ql/2ql0_consurf.spt"</scriptWhenChecked> |
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
<text>to colour the structure by Evolutionary Conservation</text> | <text>to colour the structure by Evolutionary Conservation</text> | ||
</jmolCheckbox> | </jmolCheckbox> | ||
| - | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/ | + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ql0 ConSurf]. |
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
| + | |||
| + | ==See Also== | ||
| + | *[[Rubredoxin 3D structures|Rubredoxin 3D structures]] | ||
| + | *[[Rubredoxin PDB structures|Rubredoxin PDB structures]] | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Desulfovibrio vulgaris]] | [[Category: Desulfovibrio vulgaris]] | ||
| - | [[Category: Duarte | + | [[Category: Large Structures]] |
| - | [[Category: Goodfellow | + | [[Category: Duarte IC]] |
| - | [[Category: Macedo | + | [[Category: Goodfellow BJ]] |
| - | [[Category: Markley | + | [[Category: Macedo AL]] |
| - | [[Category: Moura | + | [[Category: Markley JL]] |
| - | [[Category: Moura | + | [[Category: Moura I]] |
| - | [[Category: Nunes | + | [[Category: Moura JG]] |
| - | [[Category: Volkman | + | [[Category: Nunes SG]] |
| - | + | [[Category: Volkman BF]] | |
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Current revision
Zinc-substituted Rubredoxin from Desulfovibrio Vulgaris
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