This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.

Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


6rxu

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Current revision (10:13, 22 May 2024) (edit) (undo)
 
(One intermediate revision not shown.)
Line 3: Line 3:
<SX load='6rxu' size='340' side='right' viewer='molstar' caption='[[6rxu]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
<SX load='6rxu' size='340' side='right' viewer='molstar' caption='[[6rxu]], [[Resolution|resolution]] 3.50&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
-
<table><tr><td colspan='2'>[[6rxu]] is a 66 chain structure with sequence from [http://en.wikipedia.org/wiki/Chaetomium_thermophilum Chaetomium thermophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RXU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6RXU FirstGlance]. <br>
+
<table><tr><td colspan='2'>[[6rxu]] is a 12 chain structure with sequence from [https://en.wikipedia.org/wiki/Chaetomium_thermophilum Chaetomium thermophilum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6RXU OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6RXU FirstGlance]. <br>
-
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.5&#8491;</td></tr>
-
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=6rxu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rxu OCA], [http://pdbe.org/6rxu PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6rxu RCSB], [http://www.ebi.ac.uk/pdbsum/6rxu PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6rxu ProSAT]</span></td></tr>
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GTP:GUANOSINE-5-TRIPHOSPHATE'>GTP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6rxu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6rxu OCA], [https://pdbe.org/6rxu PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6rxu RCSB], [https://www.ebi.ac.uk/pdbsum/6rxu PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6rxu ProSAT]</span></td></tr>
</table>
</table>
== Function ==
== Function ==
-
[[http://www.uniprot.org/uniprot/G0S3V7_CHATD G0S3V7_CHATD]] Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.[PIRNR:PIRNR006515] [[http://www.uniprot.org/uniprot/PNO1_CHATD PNO1_CHATD]] Required for small ribosomal subunit (SSU) synthesis. Has a role in the processing of early nucleolar and late cytoplasmic pre-RNA species.[UniProtKB:Q99216] [[http://www.uniprot.org/uniprot/NOL10_CHATD NOL10_CHATD]] May be involved in rRNA-processing and ribosome biosynthesis.[UniProtKB:P48234] [[http://www.uniprot.org/uniprot/UTP11_CHATD UTP11_CHATD]] Involved in nucleolar processing of pre-18S ribosomal RNA.[UniProtKB:P34247]
+
[https://www.uniprot.org/uniprot/G0SBN9_CHATD G0SBN9_CHATD]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
Line 21: Line 22:
==See Also==
==See Also==
*[[Ribosome 3D structures|Ribosome 3D structures]]
*[[Ribosome 3D structures|Ribosome 3D structures]]
 +
*[[Ribosome biogenesis protein 3D structures|Ribosome biogenesis protein 3D structures]]
== References ==
== References ==
<references/>
<references/>
Line 27: Line 29:
[[Category: Chaetomium thermophilum]]
[[Category: Chaetomium thermophilum]]
[[Category: Large Structures]]
[[Category: Large Structures]]
-
[[Category: Beckmann, R]]
+
[[Category: Beckmann R]]
-
[[Category: Berninghausen, O]]
+
[[Category: Berninghausen O]]
-
[[Category: Cheng, J]]
+
[[Category: Cheng J]]
-
[[Category: Griesel, S]]
+
[[Category: Griesel S]]
-
[[Category: Hurt, E]]
+
[[Category: Hurt E]]
-
[[Category: Kellner, N]]
+
[[Category: Kellner N]]
-
[[Category: Ribosome]]
+
-
[[Category: Ribosome biogenesis]]
+
-
[[Category: Rrna]]
+

Current revision

Cryo-EM structure of the 90S pre-ribosome (Kre33-Noc4) from Chaetomium thermophilum, state B1

6rxu, resolution 3.50Å

Proteopedia Page Contributors and Editors (what is this?)

OCA

Retrieved from "http://52.214.119.220/wiki/index.php/6rxu"
Personal tools