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6tg9

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Current revision (10:18, 22 May 2024) (edit) (undo)
 
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<StructureSection load='6tg9' size='340' side='right'caption='[[6tg9]], [[Resolution|resolution]] 3.24&Aring;' scene=''>
<StructureSection load='6tg9' size='340' side='right'caption='[[6tg9]], [[Resolution|resolution]] 3.24&Aring;' scene=''>
== Structural highlights ==
== Structural highlights ==
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<table><tr><td colspan='2'>[[6tg9]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Rhodobacter_capsulatus_y262 Rhodobacter capsulatus y262]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TG9 OCA]. For a <b>guided tour on the structure components</b> use [http://proteopedia.org/fgij/fg.htm?mol=6TG9 FirstGlance]. <br>
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<table><tr><td colspan='2'>[[6tg9]] is a 8 chain structure with sequence from [https://en.wikipedia.org/wiki/Rhodobacter_capsulatus_Y262 Rhodobacter capsulatus Y262]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=6TG9 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=6TG9 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6MO:MOLYBDENUM(VI)+ION'>6MO</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=H2S:HYDROSULFURIC+ACID'>H2S</scene>, <scene name='pdbligand=MGD:2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE+GUANOSINE+DINUCLEOTIDE'>MGD</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 3.24&#8491;</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">U715_16550 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1415161 Rhodobacter capsulatus Y262]), U715_16555 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1415161 Rhodobacter capsulatus Y262]), U715_16560 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1415161 Rhodobacter capsulatus Y262]), U715_16540 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1415161 Rhodobacter capsulatus Y262])</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=6MO:MOLYBDENUM(VI)+ION'>6MO</scene>, <scene name='pdbligand=FES:FE2/S2+(INORGANIC)+CLUSTER'>FES</scene>, <scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene>, <scene name='pdbligand=H2S:HYDROSULFURIC+ACID'>H2S</scene>, <scene name='pdbligand=MGD:2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE+GUANOSINE+DINUCLEOTIDE'>MGD</scene>, <scene name='pdbligand=NAI:1,4-DIHYDRONICOTINAMIDE+ADENINE+DINUCLEOTIDE'>NAI</scene>, <scene name='pdbligand=SF4:IRON/SULFUR+CLUSTER'>SF4</scene></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Formate_dehydrogenase Formate dehydrogenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.2.1.2 1.2.1.2] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=6tg9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tg9 OCA], [https://pdbe.org/6tg9 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=6tg9 RCSB], [https://www.ebi.ac.uk/pdbsum/6tg9 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=6tg9 ProSAT]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://proteopedia.org/fgij/fg.htm?mol=6tg9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=6tg9 OCA], [http://pdbe.org/6tg9 PDBe], [http://www.rcsb.org/pdb/explore.do?structureId=6tg9 RCSB], [http://www.ebi.ac.uk/pdbsum/6tg9 PDBsum], [http://prosat.h-its.org/prosat/prosatexe?pdbcode=6tg9 ProSAT]</span></td></tr>
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</table>
</table>
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== Function ==
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[https://www.uniprot.org/uniprot/D5AQH0_RHOCB D5AQH0_RHOCB]
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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</div>
</div>
<div class="pdbe-citations 6tg9" style="background-color:#fffaf0;"></div>
<div class="pdbe-citations 6tg9" style="background-color:#fffaf0;"></div>
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==See Also==
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*[[Formate dehydrogenase 3D structures|Formate dehydrogenase 3D structures]]
== References ==
== References ==
<references/>
<references/>
__TOC__
__TOC__
</StructureSection>
</StructureSection>
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[[Category: Formate dehydrogenase]]
 
[[Category: Large Structures]]
[[Category: Large Structures]]
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[[Category: Rhodobacter capsulatus y262]]
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[[Category: Rhodobacter capsulatus Y262]]
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[[Category: Mittelstaedt, G]]
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[[Category: Mittelstaedt G]]
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[[Category: Radon, C]]
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[[Category: Radon C]]
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[[Category: Wendler, P]]
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[[Category: Wendler P]]
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[[Category: Formate oxidation]]
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[[Category: Molybdoenzyme]]
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[[Category: Nad+-dependent]]
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[[Category: Oxidoreductase]]
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Current revision

Cryo-EM Structure of NADH reduced form of NAD+-dependent Formate Dehydrogenase from Rhodobacter capsulatus

PDB ID 6tg9

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