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2apw

From Proteopedia

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[[Image:2apw.gif|left|200px]]
 
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{{Structure
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==Crystal Structure of the G17E/A52V/S54N/K66E/E80V/L81S/T87S/G96V variant of the murine T cell receptor V beta 8.2 domain==
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|PDB= 2apw |SIZE=350|CAPTION= <scene name='initialview01'>2apw</scene>, resolution 2.000&Aring;
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<StructureSection load='2apw' size='340' side='right'caption='[[2apw]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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|SITE=
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== Structural highlights ==
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|LIGAND= <scene name='pdbligand=MLA:MALONIC+ACID'>MLA</scene>
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<table><tr><td colspan='2'>[[2apw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2APW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2APW FirstGlance]. <br>
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|ACTIVITY=
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</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
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|GENE=
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLA:MALONIC+ACID'>MLA</scene></td></tr>
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|DOMAIN=
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2apw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2apw OCA], [https://pdbe.org/2apw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2apw RCSB], [https://www.ebi.ac.uk/pdbsum/2apw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2apw ProSAT]</span></td></tr>
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|RELATEDENTRY=[[2apb|2APB]], [[2apf|2APF]], [[2apt|2APT]], [[2apv|2APV]], [[2apx|2APX]], [[2aq1|2AQ1]], [[2aq2|2AQ2]], [[2aq3|2AQ3]]
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</table>
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|RESOURCES=<span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2apw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2apw OCA], [http://www.ebi.ac.uk/pdbsum/2apw PDBsum], [http://www.rcsb.org/pdb/explore.do?structureId=2apw RCSB]</span>
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== Function ==
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}}
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[https://www.uniprot.org/uniprot/A2NAI0_RAT A2NAI0_RAT]
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ap/2apw_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2apw ConSurf].
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<div style="clear:both"></div>
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'''Crystal Structure of the G17E/A52V/S54N/K66E/E80V/L81S/T87S/G96V variant of the murine T cell receptor V beta 8.2 domain'''
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==See Also==
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*[[T-cell receptor 3D structures|T-cell receptor 3D structures]]
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__TOC__
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==About this Structure==
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</StructureSection>
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2APW is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2APW OCA].
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[[Category: Large Structures]]
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==Reference==
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The nitty-gritty of protein interactions., Schreiber G, Structure. 2005 Dec;13(12):1737-8. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16338399 16338399]
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[[Category: Protein complex]]
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[[Category: Rattus norvegicus]]
[[Category: Rattus norvegicus]]
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[[Category: Cho, S.]]
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[[Category: Cho S]]
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[[Category: Guan, R.]]
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[[Category: Guan R]]
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[[Category: Kerzic, M C.]]
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[[Category: Kerzic MC]]
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[[Category: Kieke, M C.]]
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[[Category: Kieke MC]]
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[[Category: Kranz, D M.]]
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[[Category: Kranz DM]]
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[[Category: Mariuzza, R A.]]
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[[Category: Mariuzza RA]]
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[[Category: Sundberg, E J.]]
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[[Category: Sundberg EJ]]
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[[Category: Swaminathan, C P.]]
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[[Category: Swaminathan CP]]
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[[Category: Yang, J.]]
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[[Category: Yang J]]
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[[Category: the murine t cell receptor v beta 8 2 domain]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Mar 31 01:55:46 2008''
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Current revision

Crystal Structure of the G17E/A52V/S54N/K66E/E80V/L81S/T87S/G96V variant of the murine T cell receptor V beta 8.2 domain

PDB ID 2apw

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OCA

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