This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2cb0

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "2cb0" [edit=sysop:move=sysop])
Current revision (11:25, 22 May 2024) (edit) (undo)
 
(7 intermediate revisions not shown.)
Line 1: Line 1:
-
[[Image:2cb0.png|left|200px]]
 
-
{{STRUCTURE_2cb0| PDB=2cb0 | SCENE= }}
+
==Crystal structure of glucosamine 6-phosphate deaminase from Pyrococcus furiosus==
-
 
+
<StructureSection load='2cb0' size='340' side='right'caption='[[2cb0]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-
===CRYSTAL STRUCTURE OF GLUCOSAMINE 6-PHOSPHATE DEAMINASE FROM PYROCOCCUS FURIOSUS===
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[2cb0]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CB0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2CB0 FirstGlance]. <br>
-
 
+
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
-
==About this Structure==
+
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-
[[2cb0]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CB0 OCA].
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2cb0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2cb0 OCA], [https://pdbe.org/2cb0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2cb0 RCSB], [https://www.ebi.ac.uk/pdbsum/2cb0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2cb0 ProSAT]</span></td></tr>
-
 
+
</table>
-
==Reference==
+
== Function ==
-
<ref group="xtra">PMID:017387737</ref><references group="xtra"/>
+
[https://www.uniprot.org/uniprot/Q8U3U3_PYRFU Q8U3U3_PYRFU]
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cb/2cb0_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2cb0 ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Large Structures]]
[[Category: Pyrococcus furiosus]]
[[Category: Pyrococcus furiosus]]
-
[[Category: Kang, B S.]]
+
[[Category: Kang BS]]
-
[[Category: Kim, K J.]]
+
[[Category: Kim KJ]]
-
[[Category: Kim, M H.]]
+
[[Category: Kim MH]]
-
[[Category: Aldose-ketose isomerase]]
+
-
[[Category: Chitin degradation]]
+
-
[[Category: Glucosamine 6-phosphate deaminase]]
+
-
[[Category: Isomerase]]
+

Current revision

Crystal structure of glucosamine 6-phosphate deaminase from Pyrococcus furiosus

PDB ID 2cb0

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools